RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 SAA4P35542 130 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 KIR2DS2P43631 304 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 LGALS4P56470 323 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 RPL30P62888 115 aaKnown RBP7.73□□□□□ -1.17
LIMA1-211ENST00000552338 BAMBIQ13145 260 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 CATR1Q13166 79 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 POU2AF1Q16633 256 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 RPL39P5Q59GN2 51 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 DHRS7BQ6IAN0 325 aaPredicted RBP7.73□□□□□ -1.17
LIMA1-211ENST00000552338 C11orf88Q6PI97 169 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 GLDNQ6ZMI3 551 aaPredicted RBP7.73□□□□□ -1.17
LIMA1-211ENST00000552338 Q6ZNX1 250 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 ZNF383Q8NA42 475 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 ADAD2Q8NCV1 583 aaKnown RBP7.73□□□□□ -1.17
LIMA1-211ENST00000552338 GLYATL2Q8WU03 294 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 IL22RA2Q969J5 263 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 TMEM56Q96MV1 263 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 NAA60Q9H7X0 242 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 ZNRD1Q9P1U0 126 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 FLVCR2Q9UPI3 526 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 KCNIP3Q9Y2W7 256 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 TMEM56-RWDD3S4R434 201 aa7.73□□□□□ -1.17
LIMA1-211ENST00000552338 TEX15Q9BXT5 2789 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TEX13DA0A0J9YY54 714 aaPredicted RBP7.72□□□□□ -1.17
LIMA1-211ENST00000552338 C3orf85A0A1B0GTC6 90 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 C9orf170A2RU37 121 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 DBX1A6NMT0 343 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 H0YJW9 148 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 SMAD7O15105 426 aaKnown RBP7.72□□□□□ -1.17
LIMA1-211ENST00000552338 DUS4LO95620 317 aaKnown RBP7.72□□□□□ -1.17
LIMA1-211ENST00000552338 CDS2O95674 445 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 LY6G6DO95868 133 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 DHFRP00374 187 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 IL6RP08887 468 aaPredicted RBP7.72□□□□□ -1.17
LIMA1-211ENST00000552338 FGF2P09038 288 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 HLA-GP17693 338 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 DIAPH2-AS1Q14236 149 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TMEM187Q14656 261 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TRIM16LQ309B1 348 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 ABCA11PQ4W5N1 156 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 ZNF585BQ52M93 769 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TMEM177Q53S58 311 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 LHFPL4Q7Z7J7 247 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 LYG2Q86SG7 212 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TBC1D26Q86UD7 250 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 PDPNQ86YL7 162 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TGIF2LXQ8IUE1 241 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 SGPP2Q8IWX5 399 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 RPEQ96AT9 228 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 TMEM222Q9H0R3 208 aa7.72□□□□□ -1.17
LIMA1-211ENST00000552338 DUXBA0A1W2PPF3 345 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 M0R1X1 148 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 HPRT1P00492 218 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 PI3P19957 117 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 ARHGDIBP52566 201 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 DHRS2Q13268 280 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 PPP1R1AQ13522 171 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 FAM120AOSQ5T036 256 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 DYNAPQ8N1N2 210 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 OSR1Q8TAX0 266 aaPredicted RBP7.71□□□□□ -1.18
LIMA1-211ENST00000552338 ZNF431Q8TF32 576 aaPredicted RBP7.71□□□□□ -1.18
LIMA1-211ENST00000552338 MITD1Q8WV92 249 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 CAPSLQ8WWF8 208 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 TP53RKQ96S44 253 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 PLEKHA2Q9HB19 425 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 LIN7CQ9NUP9 197 aaKnown RBP7.71□□□□□ -1.18
LIMA1-211ENST00000552338 PRELID3BQ9Y3B1 194 aa7.71□□□□□ -1.18
LIMA1-211ENST00000552338 SVEP1Q4LDE5 3571 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 TRAV6A0A075B6T7 132 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 A0A0B4J293 547 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 RLN1P04808 185 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 FBP1P09467 338 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 ANXA3P12429 323 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 AKR1C4P17516 323 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 ANXA7P20073 488 aaKnown RBP7.7□□□□□ -1.18
LIMA1-211ENST00000552338 LGALS7P47929 136 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 RAB13P51153 203 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 SRPXP78539 464 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 PRB3Q04118 309 aaPredicted RBP7.7□□□□□ -1.18
LIMA1-211ENST00000552338 TATDN3Q17R31 274 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 PHLDA2Q53GA4 152 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 LIAT1Q6ZQX7 453 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 Q8N6K4 173 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 OR4C13Q8NGP0 309 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 PIFOQ8TCI5 191 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 CHAC2Q8WUX2 184 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 AIFM2Q9BRQ8 373 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 MRPL20Q9BYC9 149 aaKnown RBP7.7□□□□□ -1.18
LIMA1-211ENST00000552338 GPN1Q9HCN4 374 aaPredicted RBP7.7□□□□□ -1.18
LIMA1-211ENST00000552338 COMMD9Q9P000 198 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 WASHC3Q9Y3C0 194 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 TNCP24821 2201 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 ZANQ9Y493 2812 aa7.7□□□□□ -1.18
LIMA1-211ENST00000552338 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
LIMA1-211ENST00000552338 NDUFA3O95167 84 aa7.69□□□□□ -1.18
LIMA1-211ENST00000552338 VENTXO95231 258 aa7.69□□□□□ -1.18
LIMA1-211ENST00000552338 IFNA2P01563 188 aa7.69□□□□□ -1.18
LIMA1-211ENST00000552338 IGKV1-39P01597 117 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms