RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 VDAC1P21796 283 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 LIN54Q6MZP7 749 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 TSNAXQ99598 290 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
PRPF40B-211ENST00000551063 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 RRASP10301 218 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 DUTP33316 252 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 RPL5P46777 297 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 LINC00205P59089 165 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 CFHR3Q02985 330 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 CBX3Q13185 183 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 KHDC1LQ5JSQ8 128 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 MZT2AQ6P582 158 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 R3HDM4Q96D70 268 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 FBXL15Q9H469 300 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 NECAP2Q9NVZ3 263 aa12.13□□□□□ -0.47
PRPF40B-211ENST00000551063 SMIM31A0A1B0GVY4 71 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 ELANEP08246 267 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 PRSS3P35030 304 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 LGALS7P47929 136 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 TMBIM6P55061 237 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 PLGLAQ15195 96 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 PSG5Q15238 335 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 MSMO1Q15800 293 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 RTL8BQ17RB0 113 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 TMEM177Q53S58 311 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 CLVS1Q8IUQ0 354 aaPredicted RBP12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 OR5AP2Q8NGF4 316 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 DDB2Q92466 427 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 SCPEP1Q9HB40 452 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-211ENST00000551063 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 HPGDSO60760 199 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 PF4V1P10720 104 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 NAT1P18440 290 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 SLC6A1P30531 599 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 FOXE3Q13461 319 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 CDK10Q15131 360 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 ZNF660Q6AZW8 331 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 ADAM30Q9UKF2 790 aa12.11□□□□□ -0.47
PRPF40B-211ENST00000551063 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 LINC00473A8K010 186 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 J3QRK9 145 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 NOL3O60936 208 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 TPPPO94811 219 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 PPYP01298 95 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 IGHG4P01861 327 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 ELK1P19419 428 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 FCGR2CP31995 323 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 TAS2R46P59540 309 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 CX3CL1P78423 397 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 NDPQ00604 133 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 SPCS2Q15005 226 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 TCTEX1D1Q8N7M0 179 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 BVESQ8NE79 360 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 GPX8Q8TED1 209 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 MRPS7Q9Y2R9 242 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 VWFP04275 2813 aa12.1□□□□□ -0.47
PRPF40B-211ENST00000551063 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 SULT1C2O00338 296 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 SHOXO15266 292 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 SLC25A17O43808 307 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 FCER2P06734 321 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 AADACP22760 399 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 GIMAP1Q8WWP7 306 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
PRPF40B-211ENST00000551063 PRELID3BQ9Y3B1 194 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms