RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 SLA2Q9H6Q3 261 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 MOB1AQ9H8S9 216 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 RHOFQ9HBH0 211 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 ISYNA1Q9NPH2 558 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 IDI2-AS1Q9NZ38 188 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 PTTG2Q9NZH5 202 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 GLS2Q9UI32 602 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 AMMECR1Q9Y4X0 333 aaPredicted RBP2.68□□□□□ -1.98
LIMA1-206ENST00000550611 TMEM14AQ9Y6G1 99 aa2.68□□□□□ -1.98
LIMA1-206ENST00000550611 IGHV7-81A0A0B4J1V7 117 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 TRAV24A0A0B4J272 114 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 LINC01619G3V211 115 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 G3V318 75 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 C15orf65H3BRN8 121 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 H3BSH0 61 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 L7N2F9 121 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 HSD17B6O14756 317 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SOX15O60248 233 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GATBO75879 557 aaKnown RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CYB5AP00167 134 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 MOSP00540 346 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SERPINA3P01011 423 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 IGHV3-7P01780 117 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 IFNA6P05013 189 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 MRPL3P09001 348 aaKnown RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 OR5H8P0DN80 308 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CTRB1P17538 263 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ATF1P18846 271 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ATP6V1B2P21281 511 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 VDAC1P21796 283 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 NFYBP25208 207 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 POU3F4P49335 361 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RBP2P50120 134 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF137PP52743 207 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ATP1B3P54709 279 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RAB14P61106 215 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ACTR3P61158 418 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GAGE2BQ13066 116 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GK3PQ14409 553 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GAGE2EQ4V326 116 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 BCL2L15Q5TBC7 163 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RSBN1Q5VWQ0 802 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 TMEM236Q5W0B7 351 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CTRB2Q6GPI1 263 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GAGE2AQ6NT46 116 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF322Q6U7Q0 402 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 PLEKHG7Q6ZR37 379 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RBPMS2Q6ZRY4 209 aaKnown RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 Q75L30 129 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SSX6Q7RTT6 188 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 TMEM179BQ7Z7N9 219 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 MOB3BQ86TA1 216 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CATSPERDQ86XM0 798 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SAXO1Q8IYX7 474 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 PRSS35Q8N3Z0 413 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF565Q8N9K5 539 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 OR10G2Q8NGC3 310 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 OR52M1Q8NGK5 317 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RFESDQ8TAC1 157 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SETD6Q8TBK2 473 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 TEX47Q8TBZ9 253 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GIPC3Q8TF64 312 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SECTM1Q8WVN6 248 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RTN4IP1Q8WWV3 396 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 PP6455Q8WZ26 134 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ARPC1AQ92747 370 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ADAT3Q96EY9 351 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 BORCS8Q96FH0 119 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CIB1Q99828 191 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RASL11BQ9BPW5 248 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 FAM192AQ9GZU8 254 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ALX4Q9H161 411 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 OR51J1Q9H342 316 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SLC25A19Q9HC21 320 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 NEK6Q9HC98 313 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 EXOSC4Q9NPD3 245 aaKnown RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 CLN6Q9NWW5 311 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RHBDL2Q9NX52 303 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 NDUFA13Q9P0J0 144 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 ACTR3BQ9P1U1 418 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GAGE2DQ9UEU5 116 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 KIF25Q9UIL4 384 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 IKZF2Q9UKS7 526 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 RNF150Q9ULK6 438 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 GSTK1Q9Y2Q3 226 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 SAMHD1Q9Y3Z3 626 aaKnown RBP2.67□□□□□ -1.98
LIMA1-206ENST00000550611 WSB1Q9Y6I7 421 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 FAT1Q14517 4588 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
LIMA1-206ENST00000550611 IGHV4OR15-8A0A075B7B6 117 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 A0A087WW49 117 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 MEIKINA0A087WXM9 373 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 TRAV34A0A0B4J273 112 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 A0A1B0GU03 582 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 LOC105371267A0A1B0GV96 52 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 A0A1W2PPE3 182 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 METTL15A6NJ78 407 aa2.66□□□□□ -1.98
LIMA1-206ENST00000550611 C12orf77C9JDV5 145 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms