RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 RAB14P61106 215 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 BCL2A1Q16548 175 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 TAF9Q16594 264 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 DNLZQ5SXM8 178 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 HENMT1Q5T8I9 393 aaKnown RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 C3orf62Q6ZUJ4 267 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 ZNF550Q7Z398 422 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 COMTD1Q86VU5 262 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CYP4Z2PQ8N1L4 340 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 TMEM251Q8N6I4 163 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 ZNF565Q8N9K5 539 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 APCDD1LQ8NCL9 501 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 OR2M7Q8NG81 312 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 OR7G1Q8NGA0 311 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 OR4M2Q8NGB6 313 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 OR4A15Q8NGL6 344 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 OR8K3Q8NH51 312 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 KCTD4Q8WVF5 259 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CIDECQ96AQ7 238 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 S100PBPQ96BU1 408 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 MRPL48Q96GC5 212 aaKnown RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CENPNQ96H22 339 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CYTH2Q99418 400 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 TSNAXQ99598 290 aaKnown RBP2.67□□□□□ -1.98
LIMA1-205ENST00000550592 CIB1Q99828 191 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 SHCBP1LQ9BZQ2 653 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 HAUS4Q9H6D7 363 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 RMND1Q9NWS8 449 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 WIF1Q9Y5W5 379 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 U3KQK5 164 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 WNK2Q9Y3S1 2297 aa2.67□□□□□ -1.98
LIMA1-205ENST00000550592 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 TRAV8-4A0A0B4J246 113 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 C1orf232A0A0U1RR37 186 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 LOC105371267A0A1B0GV96 52 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 LGALS9O00182 355 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 STX10O60499 249 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 CDRT1O95170 752 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 LHBP01229 141 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 CD8AP01732 235 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 P01737 135 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 UGT2B7P16662 529 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 ZNF14P17017 642 aaPredicted RBP2.66□□□□□ -1.98
LIMA1-205ENST00000550592 PRTN3P24158 256 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 IL3RAP26951 378 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 NUP62P37198 522 aaPredicted RBP2.66□□□□□ -1.98
LIMA1-205ENST00000550592 SPINT3P49223 89 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 TAS2R43P59537 309 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
LIMA1-205ENST00000550592 FUT5Q11128 374 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 ZNHIT3Q15649 155 aaPredicted RBP2.66□□□□□ -1.98
LIMA1-205ENST00000550592 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 CLVS2Q5SYC1 327 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 MIR7-3HGQ8N6C7 128 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 SLC25A29Q8N8R3 303 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 OR13C9Q8NGT0 318 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 OR51A7Q8NH64 312 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 TEX47Q8TBZ9 253 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 ZFAND1Q8TCF1 268 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 Q96MT0 163 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 OLFM3Q96PB7 478 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 TMEM100Q9NV29 134 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 ARMC1Q9NVT9 282 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 DMAC2Q9NW81 257 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 STK38LQ9Y2H1 464 aa2.66□□□□□ -1.98
LIMA1-205ENST00000550592 FAM32AQ9Y421 112 aaKnown RBP2.66□□□□□ -1.98
LIMA1-205ENST00000550592 CMYA5Q8N3K9 4069 aa2.65□□□□□ -1.98
LIMA1-205ENST00000550592 MED12LQ86YW9 2145 aa2.65□□□□□ -1.98
LIMA1-205ENST00000550592 ANKRD20A5PA0PJZ0 165 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 ISPDA4D126 451 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 H7C2Y5 167 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 GATCO43716 136 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 CRYZL1O95825 349 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 CSTAP01040 98 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 RPS17P08708 135 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 MMP7P09237 267 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 NTF3P20783 257 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 PRSS3P35030 304 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 PHBP35232 272 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 HSPA9P38646 679 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 PPP1R2P41236 205 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 RAP1GDS1P52306 607 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 EFNA4P52798 201 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 HADHBP55084 474 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 CARD18P57730 90 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 RPL31P62899 125 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 ELF3P78545 371 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 TTMPQ5BVD1 217 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 PPP1R2P3Q6NXS1 205 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 EPGNQ6UW88 154 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 SCIMPQ6UWF3 145 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 CLVS1Q8IUQ0 354 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 FAM58AQ8N1B3 248 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 UMODL1-AS1Q8N2C9 162 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 ASCC1Q8N9N2 400 aaKnown RBP2.65□□□□□ -1.99
LIMA1-205ENST00000550592 OR5M1Q8NGP8 315 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 ANGPTL6Q8NI99 470 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 B9D2Q9BPU9 175 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 C9orf16Q9BUW7 83 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 LRRC19Q9H756 370 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms