RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 OR5B12Q96R08 314 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 PARP12Q9H0J9 701 aaKnown RBP8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 NDUFB11Q9NX14 153 aa8.44□□□□□ -1.06
VTI1BP3-201ENST00000550220 TRBV6-7A0A0A0MS04 114 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 IGKV1-6A0A0C4DH72 117 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 M0R1X1 148 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 FCN1O00602 326 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 PROP1O75360 226 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 SCGNO76038 276 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 CNIH1O95406 144 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 BRI3O95415 125 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 CA2P00918 260 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 IGKV1-16P04430 117 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 FCGR3AP08637 254 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 EGR2P11161 476 aaPredicted RBP8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 HIST1H1DP16402 221 aaKnown RBP8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 GABARAPL2P60520 117 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 GNB1P62873 340 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 ARFRP1Q13795 201 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 FXYD3Q14802 87 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 RTL8BQ17RB0 113 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 MOGAT2Q3SYC2 334 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 Q6ZS49 121 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 DRAXINQ8NBI3 349 aaPredicted RBP8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 LFNGQ8NES3 379 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 DCUN1D4Q92564 292 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 RBMXL1Q96E39 390 aaKnown RBP8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 ADTRPQ96IZ2 230 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 CABLES2Q9BTV7 478 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 ELOVL1Q9BW60 279 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 Q9H521 79 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 SLC35D1Q9NTN3 355 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 RBM7Q9Y580 266 aaKnown RBP8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 SMAD5-AS1Q9Y6J3 95 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 A3GALT2U3KPV4 340 aa8.43□□□□□ -1.06
VTI1BP3-201ENST00000550220 RAB27BO00194 218 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 BET1O15155 118 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 SOX15O60248 233 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 SAP30O75446 220 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 CTXN2P0C2S0 81 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 GSTT2P0CG29 244 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 GSTT2BP0CG30 244 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 DTYMKP23919 212 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 TPPP2P59282 170 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 PITPNAQ00169 270 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 NDPQ00604 133 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 SSX1Q16384 188 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 ASPHD1Q5U4P2 390 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 C11orf87Q6NUJ2 197 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 TPRA1Q86W33 373 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 FCGR1BQ92637 280 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 RHOVQ96L33 236 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR4C12Q96R67 309 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 PRR25Q96S07 402 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 CLCC1Q96S66 551 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 GINS4Q9BRT9 223 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 YTHDF1Q9BYJ9 559 aaKnown RBP8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 RANGRFQ9HD47 186 aaPredicted RBP8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 SDHAF2Q9NX18 166 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 KCNK7Q9Y2U2 307 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 FBXO7Q9Y3I1 522 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 U3KQK5 164 aa8.42□□□□□ -1.06
VTI1BP3-201ENST00000550220 C13orf42A0A1B0GVH6 325 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 MFNGO00587 321 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 SHOXO15266 292 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 SLC25A17O43808 307 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 CREBL2O60519 120 aaPredicted RBP8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 SLC22A5O76082 557 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 LY86O95711 162 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 TRGV3P03979 118 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 GNB3P16520 340 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 ZP3P21754 424 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 AADACP22760 399 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 FGF9P31371 208 aaPredicted RBP8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 TMEM177Q53S58 311 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 IGSF11Q5DX21 431 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 ACSM6Q6P461 480 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 TEX45Q8NA69 505 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 POC5Q8NA72 575 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 HARBI1Q96MB7 349 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 FAM103A1Q9BTL3 118 aaKnown RBP8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 ATG5Q9H1Y0 275 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR2D2Q9H210 308 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 DCSTAMPQ9H295 470 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 ZNF355PQ9NSJ1 428 aa8.41□□□□□ -1.06
VTI1BP3-201ENST00000550220 A0A075B6Q4 140 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 NOTOA8MTQ0 251 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 OR10A3P58181 314 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 TATDN3Q17R31 274 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 VMA21Q3ZAQ7 101 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 UBE2UQ5VVX9 321 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 GRPEL2Q8TAA5 225 aa8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 OSR1Q8TAX0 266 aaPredicted RBP8.4□□□□□ -1.06
VTI1BP3-201ENST00000550220 USMG5Q96IX5 58 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms