RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 IGHV1-46P01743 117 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 BCL2P10415 239 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 BMP5P22003 454 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 NFYBP25208 207 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 CASP6P55212 293 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-209ENST00000550020 OR2B8PP59922 312 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 RAB11AP62491 216 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 MEF2CQ06413 473 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ICAM4Q14773 271 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 IZUMO4Q1ZYL8 232 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ACOT6Q3I5F7 207 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-209ENST00000550020 PDLIM3Q53GG5 364 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-209ENST00000550020 AKIRIN2Q53H80 203 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 OR2B11Q5JQS5 317 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 TEX36Q5VZQ5 186 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 STUMQ69YW2 141 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 OR8G2PQ6IF36 304 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 GFRALQ6UXV0 394 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF429Q86V71 674 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 LRP11Q86VZ4 500 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 RXFP4Q8TDU9 374 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 CORO2AQ92828 525 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ABHD14AQ9BUJ0 271 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 ENY2Q9NPA8 101 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 MANBALQ9NQG1 85 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 RPRMQ9NS64 109 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 METRNQ9UJH8 293 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 PUS1Q9Y606 427 aaKnown RBP eCLIP7.44□□□□□ -1.22
TMEM116-209ENST00000550020 MED13Q9UHV7 2174 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 IGHV3-43A0A0B4J1X8 118 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 TRGV8A0A0C4DH27 118 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CTXND1A0A1B0GTU2 59 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 A0A1B0GV50 99 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 MAP1LC3B2A6NCE7 125 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 DEFB108AA8MXU0 73 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 OR2C1O95371 312 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CRYBA1P05813 215 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 S100A6P06703 90 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CGB3P0DN86 165 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CGB7P0DN87 165 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 IGHV3-43DP0DP04 118 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 FGF7P21781 194 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 HOXA1P49639 335 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-209ENST00000550020 PSMB3P49720 205 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 UCNP55089 124 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CCL20P78556 96 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 LTC4SQ16873 150 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 SP5Q6BEB4 398 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-209ENST00000550020 ASCL5Q7RTU5 278 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 HAPLN4Q86UW8 402 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 DOLPP1Q86YN1 238 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 CISD2Q8N5K1 135 aaKnown RBP7.43□□□□□ -1.22
TMEM116-209ENST00000550020 TPRX1Q8N7U7 411 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 LHX4Q969G2 390 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 MALSU1Q96EH3 234 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
TMEM116-209ENST00000550020 RARRES2Q99969 163 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 RSG1Q9BU20 258 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 MAP1LC3BQ9GZQ8 125 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 LINC00574Q9H8X3 128 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 GCM1Q9NP62 436 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 IDI2-AS1Q9NZ38 188 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 SSUH2Q9Y2M2 353 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 PCNX2A6NKB5 2137 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF407Q9C0G0 2248 aa7.43□□□□□ -1.22
TMEM116-209ENST00000550020 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 IGHV3OR15-7A0A075B7D8 119 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 SMCO3A2RU48 225 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 LINC00473A8K010 186 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ZG16O60844 167 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 IFNA10P01566 189 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 DAOP14920 347 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 RAB5AP20339 215 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 MAS1LP35410 378 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 TDGF1P3P51864 188 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 LOXL3P58215 753 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 DLK1P80370 383 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 FAM27E3Q08E93 113 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ARL16Q0P5N6 197 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 RAB31Q13636 194 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 RTL8BQ17RB0 113 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 NCR3LG1Q68D85 454 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 LCN15Q6UWW0 184 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF788Q6ZQV5 615 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ZNRF1Q8ND25 227 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 OR10G9Q8NGN4 311 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 OR10G7Q8NGN6 311 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 HIST1H2BAQ96A08 127 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 C5orf30Q96GV9 206 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 CTDSP1Q9GZU7 261 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
TMEM116-209ENST00000550020 ESRP2Q9H6T0 727 aaKnown RBP7.42□□□□□ -1.22
TMEM116-209ENST00000550020 HEYLQ9NQ87 328 aaPredicted RBP7.42□□□□□ -1.22
TMEM116-209ENST00000550020 TMEM242Q9NWH2 141 aa7.42□□□□□ -1.22
TMEM116-209ENST00000550020 FKBP11Q9NYL4 201 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms