RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 APOA2P02652 100 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 P2RY14Q15391 338 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 PHYHIPQ92561 330 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 PTX4Q96A99 478 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 RIMS4Q9H426 269 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-205ENST00000550013 TUBA4BQ9H853 241 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 Q9N2K0 584 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 H0Y980 276 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 BPNT1O95861 308 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 CSN3P07498 182 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 MOGAT2Q3SYC2 334 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 TINAGL1Q9GZM7 467 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-205ENST00000550013 SLC35D1Q9NTN3 355 aa11.72□□□□□ -0.53
RAB5C-205ENST00000550013 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-205ENST00000550013 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.53
RAB5C-205ENST00000550013 IFNA6P05013 189 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 CRYGBP07316 175 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 APELAP0DMC3 54 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 CD37P11049 281 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 SRMP19623 302 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 TMEM50BP56557 158 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 DYRK1AQ13627 763 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 HSD17B12Q53GQ0 312 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 ZNF343Q6P1L6 599 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 CEACAM19Q7Z692 300 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 GTSCR1Q86UQ5 136 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 C8orf59Q8N0T1 100 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-205ENST00000550013 FAM89BQ8N5H3 189 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 MS4A15Q8N5U1 240 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 OR6M1Q8NGM8 313 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 GFI1Q99684 422 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 PLCXD1Q9NUJ7 323 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 RDH8Q9NYR8 311 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 PEF1Q9UBV8 284 aaKnown RBP11.71□□□□□ -0.53
RAB5C-205ENST00000550013 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.53
RAB5C-205ENST00000550013 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 PACRGLQ8N7B6 248 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 BVESQ8NE79 360 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
RAB5C-205ENST00000550013 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
RAB5C-205ENST00000550013 CD3GP09693 182 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 UCHL1P09936 223 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 AADACP22760 399 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 Q8N402 240 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-205ENST00000550013 C5orf30Q96GV9 206 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 CMSS1Q9BQ75 279 aaKnown RBP11.69□□□□□ -0.54
RAB5C-205ENST00000550013 MND1Q9BWT6 205 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 PECRQ9BY49 303 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
RAB5C-205ENST00000550013 LSM2Q9Y333 95 aaKnown RBP11.69□□□□□ -0.54
RAB5C-205ENST00000550013 SRRM4A7MD48 611 aaKnown RBP11.68□□□□□ -0.54
RAB5C-205ENST00000550013 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 BRI3O95415 125 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 LGALS7P47929 136 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 MECP2P51608 486 aaKnown RBP11.68□□□□□ -0.54
RAB5C-205ENST00000550013 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 OR2D2Q9H210 308 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 PLGRKTQ9HBL7 147 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 CEPT1Q9Y6K0 416 aa11.68□□□□□ -0.54
RAB5C-205ENST00000550013 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 SLC17A2O00624 439 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 BET1O15155 118 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 SHOXO15266 292 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 JTBO76095 146 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 OR2A4O95047 310 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 CDK1P06493 297 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 CLDN12P56749 244 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 CD81P60033 236 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 TATDN3Q17R31 274 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 IGSF11Q5DX21 431 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 LINC00322Q6ZN03 302 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-205ENST00000550013 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
RAB5C-205ENST00000550013 TMEM203Q969S6 136 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 PHB2Q99623 299 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 C8orf4Q9NR00 106 aa11.67□□□□□ -0.54
RAB5C-205ENST00000550013 AK6Q9Y3D8 172 aaKnown RBP11.67□□□□□ -0.54
RAB5C-205ENST00000550013 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 BMPR1BO00238 502 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 PRH1P02810 166 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 PLA2G7Q13093 441 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 SPHARQ15513 63 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 RAB11BQ15907 218 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms