RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
GCN1-206ENST00000549815 LFNGQ8NES3 379 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 C5orf30Q96GV9 206 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 RHOVQ96L33 236 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 CLCC1Q96S66 551 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 NDUFB11Q9NX14 153 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 ZNF221Q9UK13 617 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 A3GALT2U3KPV4 340 aa10.37□□□□□ -0.75
GCN1-206ENST00000549815 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 TRBV6-7A0A0A0MS04 114 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 TRDV1A0A1B0GX56 115 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 IFITM5A6NNB3 132 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 LINC01619G3V211 115 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 DIRAS3O95661 229 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 IGLV2-23P01705 113 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 CRYGBP07316 175 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 GSTT2P0CG29 244 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 GSTT2BP0CG30 244 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 RAB6AP20340 208 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 SERPINB10P48595 397 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 HSPA13P48723 471 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 RPS16P62249 146 aaKnown RBP10.36□□□□□ -0.75
GCN1-206ENST00000549815 ACTBL2Q562R1 376 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 IGSF11Q5DX21 431 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 PYHIN1Q6K0P9 492 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 UNQ5815/PRO19632Q6UWF5 114 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 OR10R2Q8NGX6 335 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 CNBD2Q96M20 576 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 TSNAXQ99598 290 aaKnown RBP10.36□□□□□ -0.75
GCN1-206ENST00000549815 SDHAF2Q9NX18 166 aa10.36□□□□□ -0.75
GCN1-206ENST00000549815 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 M0R1X1 148 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 PDCD5O14737 125 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 SLC25A17O43808 307 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 IGHV3-11P01762 117 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 APOA2P02652 100 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 HIST1H1DP16402 221 aaKnown RBP10.35□□□□□ -0.75
GCN1-206ENST00000549815 GNB3P16520 340 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 ABHD5Q8WTS1 349 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 ARPC1AQ92747 370 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 FLYWCH2Q96CP2 140 aaKnown RBP10.35□□□□□ -0.75
GCN1-206ENST00000549815 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 VCX3BQ9H321 246 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
GCN1-206ENST00000549815 STARD9Q9P2P6 4700 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 A0A0B4J203 849 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 BET1O15155 118 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 OR8U9P0C7N5 309 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 RAB3BP20337 219 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 GALP22466 123 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 FXYD3Q14802 87 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
GCN1-206ENST00000549815 MRGPRG-AS1Q2M3A8 158 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 ACSM6Q6P461 480 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 Q6ZS49 121 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 MAFIPQ8WZ33 124 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 MS4A10Q96PG2 267 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 SLA2Q9H6Q3 261 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.34□□□□□ -0.75
GCN1-206ENST00000549815 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
GCN1-206ENST00000549815 BLOC1S6Q9UL45 172 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 RAB26Q9ULW5 256 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 U3KQK5 164 aa10.34□□□□□ -0.75
GCN1-206ENST00000549815 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
GCN1-206ENST00000549815 SAP30O75446 220 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 HSPB1P04792 205 aaKnown RBP10.33□□□□□ -0.76
GCN1-206ENST00000549815 GADD45AP24522 165 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 LGALS7P47929 136 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 TPPP2P59282 170 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 MRPS15P82914 257 aaKnown RBP10.33□□□□□ -0.76
GCN1-206ENST00000549815 PJVKQ0ZLH3 352 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 TMEM177Q53S58 311 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 C22orf42Q6IC83 251 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 OR10J5Q8NHC4 309 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 DDB2Q92466 427 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 ASCL2Q99929 193 aa10.33□□□□□ -0.76
GCN1-206ENST00000549815 ELF5Q9UKW6 265 aaPredicted RBP10.33□□□□□ -0.76
GCN1-206ENST00000549815 A0A075B6Q4 140 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 H3BUA1 57 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 MRPS14O60783 128 aaKnown RBP10.32□□□□□ -0.76
GCN1-206ENST00000549815 BRI3O95415 125 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 SPNP16150 400 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 MYL9P24844 172 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 H1FOOQ8IZA3 346 aaPredicted RBP10.32□□□□□ -0.76
GCN1-206ENST00000549815 POC5Q8NA72 575 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 BVESQ8NE79 360 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 GRPEL2Q8TAA5 225 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
GCN1-206ENST00000549815 METTL21EPA6NDL7 271 aa10.31□□□□□ -0.76
GCN1-206ENST00000549815 LINC00473A8K010 186 aa10.31□□□□□ -0.76
GCN1-206ENST00000549815 LY86O95711 162 aa10.31□□□□□ -0.76
GCN1-206ENST00000549815 TRGV3P03979 118 aa10.31□□□□□ -0.76
GCN1-206ENST00000549815 GP9P14770 177 aa10.31□□□□□ -0.76
GCN1-206ENST00000549815 FGF9P31371 208 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms