RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 H0YJW9 148 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 M0R129 80 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 M0R233 179 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MPPED1O15442 326 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MED6O75586 246 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 PGLYRP1O75594 196 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 PET100P0DJ07 73 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 SLC2A1P11166 492 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 ABOP16442 354 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 DGCR2P98153 550 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 RELQ04864 619 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 OR10V1Q8NGI7 309 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 VSTM2AQ8TAG5 236 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 IMMP2LQ96T52 175 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 TMED9Q9BVK6 235 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PPR1 153 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 WI2-2373I1.2A0A1W2PRP0 233 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MEIOCA2RUB1 952 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 RAB19A4D1S5 217 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 CRLF1O75462 422 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 RPP14O95059 124 aaKnown RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 NDUFB8O95169 186 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 C4BPBP20851 252 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 PRRX1P54821 245 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 PLA2G7Q13093 441 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 WDR25Q64LD2 544 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 GLYATL2Q8WU03 294 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 NICN1Q9BSH3 213 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MYEF2Q9P2K5 600 aaKnown RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 HSPB11Q9Y547 144 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 TRAV9-1A0A075B6T8 112 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 IGHV1-3A0A0C4DH29 117 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1B0GUS0 222 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 SERTM2A0A1B0GWG4 89 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PRD5 423 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PRF3 423 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PRM7 423 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 C12orf77C9JDV5 145 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MCRIP1C9JLW8 97 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 H7C1C5 153 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MRPS12O15235 138 aaKnown RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 FCGR3BO75015 233 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 OR4A8P0C604 315 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 OR4E1P0C645 316 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 SPP1P10451 314 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 IRF2P14316 349 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 HCCSP53701 268 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 YPEL3P61236 119 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 UBA52P62987 128 aaKnown RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 DEFB113Q30KQ7 82 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 SAPCD1Q5SSQ6 148 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 OR8G2PQ6IF36 304 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 Q6YL49 198 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 LYPD1Q8N2G4 141 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 ARHGAP5-AS1Q96IT6 56 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 OR10C1Q96KK4 312 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 NKX3-1Q99801 234 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-212ENST00000549162 RNF167Q9H6Y7 350 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 CALYQ9NYX4 217 aa3.91□□□□□ -1.78
SCAF11-212ENST00000549162 MYOCOSA0A1B0GUC4 107 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 C13orf42A0A1B0GVH6 325 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 A1L4Q6 167 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 RBAKDNA6NC62 111 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 FAM223BA6NKX1 122 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 J3QR06 171 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 UPK2O00526 184 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 HLA-HP01893 362 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 GYPBP06028 91 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 HOXB5P09067 269 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 SELENOVP59797 346 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 SERF2P84101 59 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 PAN3Q58A45 887 aaKnown RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TPTE2P1Q5T6R2 138 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 PLCXD3Q63HM9 321 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 OR2Z1Q8NG97 314 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 OR11H7Q8NGC8 314 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 OR13C5Q8NGS8 318 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 R3HDM4Q96D70 268 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 BBC3Q96PG8 261 aaPredicted RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM246Q9BRR3 403 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM242Q9NWH2 141 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 FAM230AA0A1W2PPH8 454 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 BUB1B-PAK6H3BSN5 160 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 OR10J4P0C629 311 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 USF1P22415 310 aaPredicted RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 IL3RAP26951 378 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 SPCS3P61009 180 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TREML4Q6UXN2 200 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 LGI3Q8N145 548 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TOMM5Q8N4H5 51 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 OR51D1Q8NGF3 324 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 RTN4IP1Q8WWV3 396 aaPredicted RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 RBPMSQ93062 196 aaKnown RBP3.9□□□□□ -1.78
SCAF11-212ENST00000549162 C18orf15Q96N68 181 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 YPEL4Q96NS1 127 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 TRGV9Q99603 122 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms