RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CHIAQ9BZP6 476 aa16.9■□□□□ 0.3
CACNB3-210ENST00000548874 SCP2D1Q9UJQ7 156 aa16.9■□□□□ 0.3
CACNB3-210ENST00000548874 LINC00473A8K010 186 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 GPR31O00270 319 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 PLA2G10O15496 165 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 UPK1BO75841 260 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 IGKV1D-33P01593 117 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 IGKV1-33P01594 117 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 RNASE1P07998 156 aaKnown RBP16.89■□□□□ 0.29
CACNB3-210ENST00000548874 FAM106CPP0CH98 169 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 ECI1P42126 302 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 SURF2Q15527 256 aaPredicted RBP16.89■□□□□ 0.29
CACNB3-210ENST00000548874 ZNF66Q6ZN08 573 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 IDO2Q6ZQW0 420 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 HSD17B10Q99714 261 aaKnown RBP16.89■□□□□ 0.29
CACNB3-210ENST00000548874 TNFRSF19Q9NS68 423 aa16.89■□□□□ 0.29
CACNB3-210ENST00000548874 NAP1L6A6NFF2 107 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 MC5RP33032 325 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 RPL30P62888 115 aaKnown RBP16.88■□□□□ 0.29
CACNB3-210ENST00000548874 LY6EQ16553 131 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 LIAT1Q6ZQX7 453 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 PRIMA1Q86XR5 153 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 Q8N6K4 173 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 EAF1Q96JC9 268 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-210ENST00000548874 PITPNC1Q9UKF7 332 aa16.88■□□□□ 0.29
CACNB3-210ENST00000548874 SETD2Q9BYW2 2564 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-210ENST00000548874 NF1P21359 2839 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 LINC00854A0A1B0GVQ3 168 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 PGAM2P15259 253 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 IFITM3Q01628 133 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 TAGLNQ01995 201 aaKnown RBP16.87■□□□□ 0.29
CACNB3-210ENST00000548874 KCTD9Q7L273 389 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 CMTM1Q8IZ96 169 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 OR2T10Q8NGZ9 312 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 MARCH1Q8TCQ1 289 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 RBMXL1Q96E39 390 aaKnown RBP16.87■□□□□ 0.29
CACNB3-210ENST00000548874 ZNF486Q96H40 463 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-210ENST00000548874 GPHA2Q96T91 129 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 WASHC3Q9Y3C0 194 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 CUBNO60494 3623 aa16.87■□□□□ 0.29
CACNB3-210ENST00000548874 JMJD1CQ15652 2540 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 TNFSF12O43508 249 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 CHST1O43916 411 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 PGLYRP1O75594 196 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-210ENST00000548874 MOSP00540 346 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 APOA2P02652 100 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 BTCP35070 178 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 HES1Q14469 280 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 C16orf87Q6PH81 154 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 TMEM219Q86XT9 240 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 PDPNQ86YL7 162 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 ZFAND1Q8TCF1 268 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 TSC22D3Q99576 134 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 SLC35D1Q9NTN3 355 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 GPR132Q9UNW8 380 aa16.86■□□□□ 0.29
CACNB3-210ENST00000548874 ZFHX3Q15911 3703 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 CENPXA8MT69 81 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 GPR137BO60478 399 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 OR2F2O95006 317 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 CTSDP07339 412 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-210ENST00000548874 TMEM11P17152 192 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 RND3P61587 244 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 PHLDA2Q53GA4 152 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 TCTEX1D2Q8WW35 142 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 RBM14Q96PK6 669 aaKnown RBP16.85■□□□□ 0.29
CACNB3-210ENST00000548874 SLC2A9Q9NRM0 540 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 TBC1D24Q9ULP9 559 aa16.85■□□□□ 0.29
CACNB3-210ENST00000548874 H7C2Y5 167 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 TRIM77I1YAP6 450 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 LYRM1O43325 122 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 IGKV1-16P04430 117 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 RRASP10301 218 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 PI3P19957 117 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 BRWD1-AS2P59051 145 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 SRSF2Q01130 221 aaKnown RBP16.84■□□□□ 0.29
CACNB3-210ENST00000548874 CATR1Q13166 79 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 HNF4GQ14541 408 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 C16orf82Q7Z2V1 217 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 RTBDNQ9BSG5 229 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-210ENST00000548874 C5orf66Q9H5L9 145 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 PRELID3BQ9Y3B1 194 aa16.84■□□□□ 0.29
CACNB3-210ENST00000548874 RLN1P04808 185 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RPL15P61313 204 aaKnown RBP16.83■□□□□ 0.28
CACNB3-210ENST00000548874 ASAH1Q13510 395 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RTL8BQ17RB0 113 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 ZFAND2BQ8WV99 257 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RITA1Q96K30 269 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 SCGB3A2Q96PL1 93 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RNF5Q99942 180 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 SLC25A21Q9BQT8 299 aaPredicted RBP16.83■□□□□ 0.28
CACNB3-210ENST00000548874 SLC25A33Q9BSK2 321 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RAB18Q9NP72 206 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 VSIG4Q9Y279 399 aa16.83■□□□□ 0.28
CACNB3-210ENST00000548874 RNF212BA8MTL3 300 aa16.82■□□□□ 0.28
CACNB3-210ENST00000548874 S100GP29377 79 aa16.82■□□□□ 0.28
CACNB3-210ENST00000548874 KIR2DS2P43631 304 aa16.82■□□□□ 0.28
CACNB3-210ENST00000548874 CCR6P51684 374 aa16.82■□□□□ 0.28
CACNB3-210ENST00000548874 PIGPP57054 158 aa16.82■□□□□ 0.28
CACNB3-210ENST00000548874 RBMS2Q15434 407 aaKnown RBP16.82■□□□□ 0.28
CACNB3-210ENST00000548874 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms