RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
DDX54-205ENST00000548786 UBE2NLQ5JXB2 153 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 AUNIPQ9H7T9 357 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 IGKV1D-13A0A0B4J2D9 117 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 RBBP9O75884 186 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 DIRAS3O95661 229 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 IGF1P05019 195 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 IGKV1-13P0DP09 117 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 GNB1P62873 340 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 CX3CL1P78423 397 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 CFHR3Q02985 330 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 GPR107Q5VW38 600 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 PDPNQ86YL7 162 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 COMMD1Q8N668 190 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 BVESQ8NE79 360 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
DDX54-205ENST00000548786 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
DDX54-205ENST00000548786 COMMD3Q9UBI1 195 aa12.36□□□□□ -0.43
DDX54-205ENST00000548786 A0A0A6YYH2 397 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 A6NJ64 397 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 TUSC2O75896 110 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 CA2P00918 260 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 CTXN2P0C2S0 81 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
DDX54-205ENST00000548786 RAB25P57735 213 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 FOXE3Q13461 319 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 TMEM69Q5SWH9 247 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 ZNF695Q8IW36 515 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 S100A16Q96FQ6 103 aaKnown RBP12.35□□□□□ -0.43
DDX54-205ENST00000548786 HARBI1Q96MB7 349 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 TSNAXQ99598 290 aaKnown RBP12.35□□□□□ -0.43
DDX54-205ENST00000548786 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
DDX54-205ENST00000548786 LINC00473A8K010 186 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 XRCC3O43542 346 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 IGHG4P01861 327 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 EIF4EP06730 217 aaKnown RBP12.34□□□□□ -0.43
DDX54-205ENST00000548786 THBS3P49746 956 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 TAS2R20P59543 309 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 CBX3Q13185 183 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
DDX54-205ENST00000548786 ZNF645Q8N7E2 425 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 GRPEL2Q8TAA5 225 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 OR5B12Q96R08 314 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 GPHA2Q96T91 129 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 MRPS26Q9BYN8 205 aaKnown RBP12.34□□□□□ -0.43
DDX54-205ENST00000548786 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 IFT46Q9NQC8 304 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 ZFP57Q9NU63 452 aa12.34□□□□□ -0.43
DDX54-205ENST00000548786 PRKDCP78527 4128 aaKnown RBP12.33□□□□□ -0.44
DDX54-205ENST00000548786 A0A1W2PN81 502 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 SHOXO15266 292 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 CRYZL1O95825 349 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 ELANEP08246 267 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 OR5H8P0DN80 308 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 AADACP22760 399 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 FCGR2CP31995 323 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
DDX54-205ENST00000548786 CHRNA7P36544 502 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
DDX54-205ENST00000548786 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 LINC00482Q8N8I6 264 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 SNAPC3Q92966 411 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 RNF5Q99942 180 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 MRPS7Q9Y2R9 242 aaKnown RBP12.33□□□□□ -0.44
DDX54-205ENST00000548786 TGP01266 2768 aa12.33□□□□□ -0.44
DDX54-205ENST00000548786 HPGDSO60760 199 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 TMEM127O75204 238 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 GABARAPO95166 117 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 HLA-DQB1P01920 261 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
DDX54-205ENST00000548786 PSMB8P28062 276 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 PPIFP30405 207 aaKnown RBP12.32□□□□□ -0.44
DDX54-205ENST00000548786 FXYD4P59646 89 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 CTF1Q16619 201 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
DDX54-205ENST00000548786 IDO2Q6ZQW0 420 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 KCTD9Q7L273 389 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 GPR141Q7Z602 305 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 PPP1R27Q86WC6 154 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 ARPC1AQ92747 370 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 DCUN1D5Q9BTE7 237 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms