RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 VSIG4Q9Y279 399 aa4.01□□□□□ -1.77
APP-217ENST00000548570 TBL2Q9Y4P3 447 aaKnown RBP4.01□□□□□ -1.77
APP-217ENST00000548570 HILPDAQ9Y5L2 63 aa4.01□□□□□ -1.77
APP-217ENST00000548570 MINOS1-NBL1R4GNA1 71 aa4.01□□□□□ -1.77
APP-217ENST00000548570 DNHD1Q96M86 4753 aa4.01□□□□□ -1.77
APP-217ENST00000548570 ACANP16112 2415 aa4□□□□□ -1.77
APP-217ENST00000548570 SRRM4A7MD48 611 aaKnown RBP4□□□□□ -1.77
APP-217ENST00000548570 LEUTXA8MZ59 168 aa4□□□□□ -1.77
APP-217ENST00000548570 TOR1AO14656 332 aa4□□□□□ -1.77
APP-217ENST00000548570 TIMM23O14925 209 aa4□□□□□ -1.77
APP-217ENST00000548570 HSPA12AO43301 675 aa4□□□□□ -1.77
APP-217ENST00000548570 TNFSF12O43508 249 aa4□□□□□ -1.77
APP-217ENST00000548570 CHST1O43916 411 aa4□□□□□ -1.77
APP-217ENST00000548570 PGLYRP1O75594 196 aaPredicted RBP4□□□□□ -1.77
APP-217ENST00000548570 IGKV1-39P01597 117 aa4□□□□□ -1.77
APP-217ENST00000548570 IGKV1-16P04430 117 aa4□□□□□ -1.77
APP-217ENST00000548570 IGKV1D-39P04432 117 aa4□□□□□ -1.77
APP-217ENST00000548570 AMY1AP04745 511 aa4□□□□□ -1.77
APP-217ENST00000548570 SLC6A1P30531 599 aa4□□□□□ -1.77
APP-217ENST00000548570 DUTP33316 252 aaKnown RBP4□□□□□ -1.77
APP-217ENST00000548570 IER3P46695 156 aa4□□□□□ -1.77
APP-217ENST00000548570 DYNLT3P51808 116 aa4□□□□□ -1.77
APP-217ENST00000548570 LUMP51884 338 aaPredicted RBP4□□□□□ -1.77
APP-217ENST00000548570 PRRX1P54821 245 aa4□□□□□ -1.77
APP-217ENST00000548570 UCP3P55916 312 aa4□□□□□ -1.77
APP-217ENST00000548570 FXYD4P59646 89 aa4□□□□□ -1.77
APP-217ENST00000548570 BPIFB3P59826 476 aa4□□□□□ -1.77
APP-217ENST00000548570 ASAH1Q13510 395 aa4□□□□□ -1.77
APP-217ENST00000548570 EBI3Q14213 229 aa4□□□□□ -1.77
APP-217ENST00000548570 SLC9A3R2Q15599 337 aa4□□□□□ -1.77
APP-217ENST00000548570 ZNF585BQ52M93 769 aa4□□□□□ -1.77
APP-217ENST00000548570 ACTBL2Q562R1 376 aa4□□□□□ -1.77
APP-217ENST00000548570 GPR157Q5UAW9 335 aa4□□□□□ -1.77
APP-217ENST00000548570 IDO2Q6ZQW0 420 aa4□□□□□ -1.77
APP-217ENST00000548570 TMEM17Q86X19 198 aa4□□□□□ -1.77
APP-217ENST00000548570 PRIMA1Q86XR5 153 aa4□□□□□ -1.77
APP-217ENST00000548570 ARRDC1Q8N5I2 433 aa4□□□□□ -1.77
APP-217ENST00000548570 ZNF645Q8N7E2 425 aa4□□□□□ -1.77
APP-217ENST00000548570 ZBTB34Q8NCN2 500 aa4□□□□□ -1.77
APP-217ENST00000548570 BVESQ8NE79 360 aa4□□□□□ -1.77
APP-217ENST00000548570 OR8H1Q8NGG4 311 aa4□□□□□ -1.77
APP-217ENST00000548570 OR5AN1Q8NGI8 311 aa4□□□□□ -1.77
APP-217ENST00000548570 OR6F1Q8NGZ6 308 aa4□□□□□ -1.77
APP-217ENST00000548570 TERB2Q8NHR7 220 aa4□□□□□ -1.77
APP-217ENST00000548570 MARCH1Q8TCQ1 289 aa4□□□□□ -1.77
APP-217ENST00000548570 SECTM1Q8WVN6 248 aa4□□□□□ -1.77
APP-217ENST00000548570 MALSU1Q96EH3 234 aa4□□□□□ -1.77
APP-217ENST00000548570 CCDC140Q96MF4 163 aa4□□□□□ -1.77
APP-217ENST00000548570 GINS4Q9BRT9 223 aa4□□□□□ -1.77
APP-217ENST00000548570 BEX2Q9BXY8 128 aa4□□□□□ -1.77
APP-217ENST00000548570 PLSCR3Q9NRY6 295 aa4□□□□□ -1.77
APP-217ENST00000548570 TAS2R8Q9NYW2 309 aa4□□□□□ -1.77
APP-217ENST00000548570 PIPOXQ9P0Z9 390 aa4□□□□□ -1.77
APP-217ENST00000548570 CDC42EP3Q9UKI2 254 aa4□□□□□ -1.77
APP-217ENST00000548570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4□□□□□ -1.77
APP-217ENST00000548570 ARID1AO14497 2285 aa4□□□□□ -1.77
APP-217ENST00000548570 FBN1P35555 2871 aaKnown RBP4□□□□□ -1.77
APP-217ENST00000548570 FN1P02751 2386 aaKnown RBP3.99□□□□□ -1.77
APP-217ENST00000548570 CREBBPQ92793 2442 aa3.99□□□□□ -1.77
APP-217ENST00000548570 A6NDX4 124 aa3.99□□□□□ -1.77
APP-217ENST00000548570 OOSP1A8MZH6 123 aa3.99□□□□□ -1.77
APP-217ENST00000548570 H0YJW9 148 aa3.99□□□□□ -1.77
APP-217ENST00000548570 M0R1X1 148 aa3.99□□□□□ -1.77
APP-217ENST00000548570 RAB29O14966 203 aa3.99□□□□□ -1.77
APP-217ENST00000548570 LYRM1O43325 122 aa3.99□□□□□ -1.77
APP-217ENST00000548570 HOXA3O43365 443 aaPredicted RBP3.99□□□□□ -1.77
APP-217ENST00000548570 RAMP3O60896 148 aa3.99□□□□□ -1.77
APP-217ENST00000548570 RGS11O94810 467 aa3.99□□□□□ -1.77
APP-217ENST00000548570 NDUFB6O95139 128 aa3.99□□□□□ -1.77
APP-217ENST00000548570 VENTXO95231 258 aa3.99□□□□□ -1.77
APP-217ENST00000548570 IGLV2-23P01705 113 aa3.99□□□□□ -1.77
APP-217ENST00000548570 GAPDHP04406 335 aaKnown RBP3.99□□□□□ -1.77
APP-217ENST00000548570 CRYGBP07316 175 aa3.99□□□□□ -1.77
APP-217ENST00000548570 CTSDP07339 412 aaPredicted RBP3.99□□□□□ -1.77
APP-217ENST00000548570 SNRNP70P08621 437 aaKnown RBP3.99□□□□□ -1.77
APP-217ENST00000548570 FAM157CP0CG43 387 aa3.99□□□□□ -1.77
APP-217ENST00000548570 CNTFRP26992 372 aa3.99□□□□□ -1.77
APP-217ENST00000548570 SRP14P37108 136 aaKnown RBP3.99□□□□□ -1.77
APP-217ENST00000548570 GPR12P47775 334 aa3.99□□□□□ -1.77
APP-217ENST00000548570 RAB7AP51149 207 aa3.99□□□□□ -1.77
APP-217ENST00000548570 F2RL1P55085 397 aa3.99□□□□□ -1.77
APP-217ENST00000548570 SUPT4H1P63272 117 aaKnown RBP3.99□□□□□ -1.77
APP-217ENST00000548570 SSBP2P81877 361 aaPredicted RBP3.99□□□□□ -1.77
APP-217ENST00000548570 DHODHQ02127 395 aa3.99□□□□□ -1.77
APP-217ENST00000548570 MEF2DQ14814 521 aa3.99□□□□□ -1.77
APP-217ENST00000548570 ODF1Q14990 250 aa3.99□□□□□ -1.77
APP-217ENST00000548570 MSMO1Q15800 293 aa3.99□□□□□ -1.77
APP-217ENST00000548570 SCGB2B2Q4G0G5 96 aa3.99□□□□□ -1.77
APP-217ENST00000548570 PHLDA2Q53GA4 152 aa3.99□□□□□ -1.77
APP-217ENST00000548570 TRIQKQ629K1 86 aa3.99□□□□□ -1.77
APP-217ENST00000548570 ZNF57Q68EA5 555 aaPredicted RBP3.99□□□□□ -1.77
APP-217ENST00000548570 FAM71F2Q6NXP2 309 aa3.99□□□□□ -1.77
APP-217ENST00000548570 NRARPQ7Z6K4 114 aa3.99□□□□□ -1.77
APP-217ENST00000548570 TGIF2LXQ8IUE1 241 aa3.99□□□□□ -1.77
APP-217ENST00000548570 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.99□□□□□ -1.77
APP-217ENST00000548570 OR10X1Q8NGY0 326 aa3.99□□□□□ -1.77
APP-217ENST00000548570 LHFPL5Q8TAF8 219 aa3.99□□□□□ -1.77
APP-217ENST00000548570 TOMM40LQ969M1 308 aa3.99□□□□□ -1.77
APP-217ENST00000548570 DUX5Q96PT3 197 aa3.99□□□□□ -1.77
APP-217ENST00000548570 TSC22D3Q99576 134 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms