RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TPTE2P1Q5T6R2 138 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 LHFPL4Q7Z7J7 247 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 ZNF431Q8TF32 576 aaPredicted RBP23.3■■□□□ 1.32
BRF1-213ENST00000548421 MRPL20Q9BYC9 149 aaKnown RBP23.3■■□□□ 1.32
BRF1-213ENST00000548421 SNRPGP15A8MWD9 76 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 CREBL2O60519 120 aaPredicted RBP23.3■■□□□ 1.32
BRF1-213ENST00000548421 GAPDHP04406 335 aaKnown RBP23.3■■□□□ 1.32
BRF1-213ENST00000548421 CT45A6P0DMU7 189 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 CT45A5P0DMU8 189 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 CT45A7P0DMV0 189 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 IGHV4-38-2P0DP08 117 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 SAA4P35542 130 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 LINC00205P59089 165 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 KRTAP1-1Q07627 177 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 ZNF816Q0VGE8 651 aaPredicted RBP23.3■■□□□ 1.32
BRF1-213ENST00000548421 CBX3Q13185 183 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 SLC9A3R2Q15599 337 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 TP53RKQ96S44 253 aa23.3■■□□□ 1.32
BRF1-213ENST00000548421 CSPG4Q6UVK1 2322 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 ACANP16112 2415 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 IGHV3OR16-10A0A075B7F0 116 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 DUS4LO95620 317 aaKnown RBP23.29■■□□□ 1.32
BRF1-213ENST00000548421 EPHA1P21709 976 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 SP6Q3SY56 376 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 KLF17Q5JT82 389 aaPredicted RBP23.29■■□□□ 1.32
BRF1-213ENST00000548421 CASTOR1Q8WTX7 329 aa23.29■■□□□ 1.32
BRF1-213ENST00000548421 PIP4P2Q8N4L2 257 aa23.28■■□□□ 1.32
BRF1-213ENST00000548421 TCTEX1D1Q8N7M0 179 aa23.28■■□□□ 1.32
BRF1-213ENST00000548421 ZNF383Q8NA42 475 aa23.28■■□□□ 1.32
BRF1-213ENST00000548421 PRELID3BQ9Y3B1 194 aa23.28■■□□□ 1.32
BRF1-213ENST00000548421 RUSC1-AS1Q66K80 236 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 DDB2Q92466 427 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 MALSU1Q96EH3 234 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 NABP2Q9BQ15 211 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 TMEM222Q9H0R3 208 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 HILPDAQ9Y5L2 63 aa23.27■■□□□ 1.32
BRF1-213ENST00000548421 A0A1B0GVG6 124 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 OOSP1A8MZH6 123 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 TMEM187Q14656 261 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 GLYATL2Q8WU03 294 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 MITD1Q8WV92 249 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 OR51J1Q9H342 316 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 TLN2Q9Y4G6 2542 aa23.26■■□□□ 1.31
BRF1-213ENST00000548421 IGHV1-3A0A0C4DH29 117 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 UCP1P25874 307 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 KIR2DS2P43631 304 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 TAGLNQ01995 201 aaKnown RBP23.25■■□□□ 1.31
BRF1-213ENST00000548421 SSX2Q16385 188 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 OR2B11Q5JQS5 317 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 CCDC144NLQ6NUI1 221 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 BRD3OSQ6XYD6 125 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 SPAG16Q8N0X2 631 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 OR8H3Q8N146 312 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 PHB2Q99623 299 aa23.25■■□□□ 1.31
BRF1-213ENST00000548421 FAM212BQ9NTI7 297 aaPredicted RBP23.25■■□□□ 1.31
BRF1-213ENST00000548421 BPIFB3P59826 476 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 ANKRD55Q3KP44 614 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 LIAT1Q6ZQX7 453 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 OR5AN1Q8NGI8 311 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 COQ8AQ8NI60 647 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 NANPQ8TBE9 248 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 CD300LFQ8TDQ1 290 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 C17orf50Q8WW18 174 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 AJUBAQ96IF1 538 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 PRR13Q9NZ81 148 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 hCG_2014768A0A024R1R8 64 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 A0A1W2PPI3 338 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 H0YJW9 148 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 FCGR3BO75015 233 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 FSHBP01225 129 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 APOA2P02652 100 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 SERPINE2P07093 398 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 BRWD1-AS2P59051 145 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 SRPXP78539 464 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 C12orf45Q8N5I9 185 aaPredicted RBP23.24■■□□□ 1.31
BRF1-213ENST00000548421 TEX29Q8N6K0 151 aa23.24■■□□□ 1.31
BRF1-213ENST00000548421 SSNA1O43805 119 aa23.23■■□□□ 1.31
BRF1-213ENST00000548421 RAMP3O60896 148 aa23.23■■□□□ 1.31
BRF1-213ENST00000548421 RTL8BQ17RB0 113 aa23.23■■□□□ 1.31
BRF1-213ENST00000548421 MOB3BQ86TA1 216 aa23.23■■□□□ 1.31
BRF1-213ENST00000548421 SLC35D1Q9NTN3 355 aa23.23■■□□□ 1.31
BRF1-213ENST00000548421 A0A0B4J2A0 478 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 A8MV72 311 aaPredicted RBP23.22■■□□□ 1.31
BRF1-213ENST00000548421 RBFOX2O43251 390 aaKnown RBP eCLIP23.22■■□□□ 1.31
BRF1-213ENST00000548421 ZNF585BQ52M93 769 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 LGI3Q8N145 548 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 DYNAPQ8N1N2 210 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 TMEM56Q96MV1 263 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 SHPKQ9UHJ6 478 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 NUP50Q9UKX7 468 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 TMEM56-RWDD3S4R434 201 aa23.22■■□□□ 1.31
BRF1-213ENST00000548421 CDS2O95674 445 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 RRASP10301 218 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 RPA2P15927 270 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 MC5RP33032 325 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 LIN54Q6MZP7 749 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 LRTM2Q8N967 370 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 OR4S2Q8NH73 311 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 TMUB1Q9BVT8 246 aa23.21■■□□□ 1.31
BRF1-213ENST00000548421 LPAR6P43657 344 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms