RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 LRRC46Q96FV0 321 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 SH3BGRL3Q9H299 93 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 IDI2-AS1Q9NZ38 188 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 LAMP3Q9UQV4 416 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 hADV38S2A0JD32 116 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 H3BP45 60 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 M0R1X1 148 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 IAPPP10997 89 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 SMUG1Q53HV7 270 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 MMP26Q9NRE1 261 aa17.27■□□□□ 0.35
RITA1-201ENST00000548278 CACNA1AO00555 2505 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 NUDT19A8MXV4 375 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 LOXP28300 417 aaPredicted RBP17.26■□□□□ 0.35
RITA1-201ENST00000548278 UQCC3Q6UW78 93 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 C1orf229Q6ZS94 237 aaPredicted RBP17.26■□□□□ 0.35
RITA1-201ENST00000548278 ZNF439Q8NDP4 499 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 PARP11Q9NR21 331 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 HSPB7Q9UBY9 170 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 LINC00312Q9Y6C7 94 aa17.26■□□□□ 0.35
RITA1-201ENST00000548278 RAB29O14966 203 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 MMP23AO75900 390 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 DANCRP0C864 163 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 SULT1A1P50225 295 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 TAS2R30P59541 319 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 BLOC1S1P78537 153 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 TNFRSF9Q07011 255 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 TMEM30BQ3MIR4 351 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 STX12Q86Y82 276 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 STPG2Q8N412 459 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 BPIFCQ8NFQ6 507 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 HRH4Q9H3N8 390 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 C19orf12Q9NSK7 152 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 PSENENQ9NZ42 101 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 A0A1W2PPE3 182 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 NFYBP25208 207 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 UBE2KP61086 200 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 MEF2CQ06413 473 aaPredicted RBP17.25■□□□□ 0.35
RITA1-201ENST00000548278 TFF3Q07654 80 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 ZNF672Q499Z4 452 aaPredicted RBP17.25■□□□□ 0.35
RITA1-201ENST00000548278 BTNL8Q6UX41 500 aa17.25■□□□□ 0.35
RITA1-201ENST00000548278 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.25■□□□□ 0.35
RITA1-201ENST00000548278 YLPM1P49750 1951 aaKnown RBP17.25■□□□□ 0.35
RITA1-201ENST00000548278 IGHV1-69-2A0A0G2JMI3 117 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 FCGR3BO75015 233 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 TMEM267Q0VDI3 215 aaPredicted RBP17.24■□□□□ 0.35
RITA1-201ENST00000548278 ZNF273Q14593 569 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 LYPD2Q6UXB3 125 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 IL34Q6ZMJ4 242 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 H2BFWTQ7Z2G1 175 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 MUC15Q8N387 334 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 RBKSQ9H477 322 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 RPUSD1Q9UJJ7 312 aaKnown RBP17.24■□□□□ 0.35
RITA1-201ENST00000548278 MARCH11A6NNE9 402 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 RBFOX2O43251 390 aaKnown RBP eCLIP17.24■□□□□ 0.35
RITA1-201ENST00000548278 PJVKQ0ZLH3 352 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 PRAMEF5Q5TYX0 476 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 Q6ZRG5 221 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.24■□□□□ 0.35
RITA1-201ENST00000548278 ATP5SQ99766 215 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 TMEM204Q9BSN7 226 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 NARFLQ9H6Q4 476 aa17.24■□□□□ 0.35
RITA1-201ENST00000548278 SCO1O75880 301 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 HPRT1P00492 218 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 ATP6V0CP27449 155 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 RPL31P62899 125 aaKnown RBP17.23■□□□□ 0.35
RITA1-201ENST00000548278 DDB2Q92466 427 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 R3HDM4Q96D70 268 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 ZNF251Q9BRH9 671 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 CACFD1Q9UGQ2 172 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 HCFC1P51610 2035 aa17.23■□□□□ 0.35
RITA1-201ENST00000548278 SAA2-SAA4A0A096LPE2 208 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 SAA2P0DJI9 122 aaPredicted RBP17.22■□□□□ 0.35
RITA1-201ENST00000548278 LYPD6BQ8NI32 183 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 KAAG1Q9UBP8 84 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 ITPR1Q14643 2758 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 RAB5CP51148 216 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 TSNAXQ99598 290 aaKnown RBP17.22■□□□□ 0.35
RITA1-201ENST00000548278 CTSZQ9UBR2 303 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 PRELID3BQ9Y3B1 194 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 RFNGQ9Y644 331 aa17.22■□□□□ 0.35
RITA1-201ENST00000548278 ABCA4P78363 2273 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 NDUFB3O43676 98 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 METTL15P1P0C7V9 234 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 F2RL1P55085 397 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 SRSF3P84103 164 aaKnown RBP17.21■□□□□ 0.35
RITA1-201ENST00000548278 ARL16Q0P5N6 197 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 TMEM200BQ69YZ2 307 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 HAPLN4Q86UW8 402 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 OR10A7Q8NGE5 316 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 GAL3ST2Q9H3Q3 398 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 NUP50Q9UKX7 468 aa17.21■□□□□ 0.35
RITA1-201ENST00000548278 TPRP12270 2363 aaKnown RBP17.21■□□□□ 0.34
RITA1-201ENST00000548278 DFFBO76075 338 aa17.2■□□□□ 0.34
RITA1-201ENST00000548278 KIR2DS2P43631 304 aa17.2■□□□□ 0.34
RITA1-201ENST00000548278 MRPS11P82912 194 aaKnown RBP17.2■□□□□ 0.34
RITA1-201ENST00000548278 LRRC10Q5BKY1 277 aa17.2■□□□□ 0.34
RITA1-201ENST00000548278 SLC25A48Q6ZT89 311 aaKnown RBP17.2■□□□□ 0.34
RITA1-201ENST00000548278 LYG1Q8N1E2 194 aa17.2■□□□□ 0.34
RITA1-201ENST00000548278 S1PR3Q99500 378 aa17.2■□□□□ 0.34
RITA1-201ENST00000548278 C1QL1O75973 258 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms