RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 IL34Q6ZMJ4 242 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 RFESDQ8TAC1 157 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 NARS2Q96I59 477 aaKnown RBP13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 DCTN5Q9BTE1 182 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 RNF7Q9UBF6 113 aa13.71□□□□□ -0.22
CHMP1A-204ENST00000547687 SPINT2O43291 252 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 TMEM50AO95807 157 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 AKR1C2P52895 323 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 IZUMO4Q1ZYL8 232 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 Q6ZRM9 215 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 LAMP3Q9UQV4 416 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
CHMP1A-204ENST00000547687 MEX3AA1L020 520 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 C15orf65H3BRN8 121 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 MGST3O14880 152 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 APOC3P02656 99 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 TNFRSF1AP19438 455 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 GZMHP20718 246 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 OMGP23515 440 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 PJVKQ0ZLH3 352 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 EFNB3Q15768 340 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 Q8TCH9 128 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 PARP11Q9NR21 331 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 DCAF16Q9NXF7 216 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 CACNG5Q9UF02 275 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 KIAA1324LA8MWY0 1029 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 B9A039 149 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 SPP1P10451 314 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 CD80P33681 288 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 PAX9P55771 341 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 HTD2P86397 168 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 AKR1C1Q04828 323 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 LINC00469Q8N7U9 141 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 SAP30LQ9HAJ7 183 aa13.69□□□□□ -0.22
CHMP1A-204ENST00000547687 ODAMA1E959 279 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 TMEM218A2RU14 115 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 SOD3P08294 240 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 EIF4EBP1Q13541 118 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 CLINT1Q14677 625 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 MSMO1Q15800 293 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 BTNL8Q6UX41 500 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 MUC15Q8N387 334 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 HSD17B11Q8NBQ5 300 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 ZNRF1Q8ND25 227 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 MS4A7Q9GZW8 240 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 MS4A5Q9H3V2 200 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 BEX4Q9NWD9 120 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 K7N7A8 449 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 SRSF3P84103 164 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 BAXQ07812 192 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 ZNF266Q14584 549 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 Q6ZRG5 221 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 ODF3L1Q8IXM7 274 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 EGLN1Q9GZT9 426 aa13.68□□□□□ -0.22
CHMP1A-204ENST00000547687 SIGLEC5O15389 551 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 TSPAN9O75954 239 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 CST7O76096 145 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 DANCRP0C864 163 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 CD99P14209 185 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 IRF2P14316 349 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 DYNLT3P51808 116 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 RPL23AP62750 156 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 CATR1Q13166 79 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 CR1LQ2VPA4 569 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 Q5PR19 223 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 DEFB108BQ8NET1 73 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 OR5C1Q8NGR4 320 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 SH3BGRL3Q9H299 93 aa13.67□□□□□ -0.22
CHMP1A-204ENST00000547687 F2RL1P55085 397 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 LTC4SQ16873 150 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 TMUB1Q9BVT8 246 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 TREM1Q9NP99 234 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 PSG11Q9UQ72 335 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 RAMP3O60896 148 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 CDKN1AP38936 164 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 ARHGDIBP52566 201 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 EDDM3BP56851 147 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 DEFA5Q01523 94 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 BTN1A1Q13410 526 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 BTNL3Q6UXE8 466 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 TMEM217Q8N7C4 229 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 TCTEX1D2Q8WW35 142 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 CACFD1Q9UGQ2 172 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 MMP24Q9Y5R2 645 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 CSPG4Q6UVK1 2322 aa13.66□□□□□ -0.22
CHMP1A-204ENST00000547687 ST8SIA5O15466 376 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms