RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DUTP33316 252 aaKnown RBP18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 PPP5CP53041 499 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 HNF4GQ14541 408 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 AADACL3Q5VUY0 350 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 LPCAT3Q6P1A2 487 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF383Q8NA42 475 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 TERB2Q8NHR7 220 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 EAF1Q96JC9 268 aaPredicted RBP18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 AKR1E2Q96JD6 320 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 WDR12Q9GZL7 423 aaKnown RBP18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 FBN1P35555 2871 aaKnown RBP18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 FAM181BA6NEQ2 426 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 MOSP00540 346 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 IL7P13232 177 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 TMEM11P17152 192 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 UCP3P55916 312 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF846Q147U1 533 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 FBLN7Q53RD9 439 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF818PQ6ZRF7 136 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 HSD17B10Q99714 261 aaKnown RBP18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 CCDC32Q9BV29 185 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 MCUBQ9NWR8 336 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 WASHC3Q9Y3C0 194 aa18.55■□□□□ 0.56
SMARCD1-203ENST00000547247 H7C2Y5 167 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 APOA2P02652 100 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 CD40LGP29965 261 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 RPL15P61313 204 aaKnown RBP18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 TAGLNQ01995 201 aaKnown RBP18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 C16orf82Q7Z2V1 217 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 OR51S1Q8NGJ8 323 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 RBM14Q96PK6 669 aaKnown RBP18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 PRRT1Q99946 306 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 SLC25A33Q9BSK2 321 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 HRASLSQ9HDD0 168 aa18.54■□□□□ 0.56
SMARCD1-203ENST00000547247 LINC00473A8K010 186 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 CHST1O43916 411 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 OR2F2O95006 317 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 CRYBA1P05813 215 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 ZNF66Q6ZN08 573 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 BVESQ8NE79 360 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 SLC35D1Q9NTN3 355 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 SCP2D1Q9UJQ7 156 aa18.53■□□□□ 0.56
SMARCD1-203ENST00000547247 EIF4EBP1Q13541 118 aaPredicted RBP18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 KCTD9Q7L273 389 aa18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 CMTM1Q8IZ96 169 aa18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 SLC38A6Q8IZM9 456 aa18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 RBMXL1Q96E39 390 aaKnown RBP18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 SLC2A8Q9NY64 477 aa18.52■□□□□ 0.56
SMARCD1-203ENST00000547247 GPR31O00270 319 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 TNFSF12O43508 249 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 PGAM2P15259 253 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 RPL30P62888 115 aaKnown RBP18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 DHRS7BQ6IAN0 325 aaPredicted RBP18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 PDPNQ86YL7 162 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 Q8N6K4 173 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 DDB2Q92466 427 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 RSRP1Q9BUV0 290 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 PRELID3BQ9Y3B1 194 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 ATRQ13535 2644 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 RRASP10301 218 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 S100GP29377 79 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 ECI1P42126 302 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 RTL8BQ17RB0 113 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 IDO2Q6ZQW0 420 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 TCTEX1D2Q8WW35 142 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 GPHA2Q96T91 129 aa18.51■□□□□ 0.55
SMARCD1-203ENST00000547247 CBX3Q13185 183 aa18.5■□□□□ 0.55
SMARCD1-203ENST00000547247 OR8H1Q8NGG4 311 aa18.5■□□□□ 0.55
SMARCD1-203ENST00000547247 ZFAND1Q8TCF1 268 aa18.5■□□□□ 0.55
SMARCD1-203ENST00000547247 MOB4Q9Y3A3 225 aa18.5■□□□□ 0.55
SMARCD1-203ENST00000547247 M0QZK8 103 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 CATR1Q13166 79 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 KRTAP24-1Q3LI83 254 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 OR4C13Q8NGP0 309 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 MARCH1Q8TCQ1 289 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 MRGPRFQ96AM1 343 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 FLYWCH2Q96CP2 140 aaKnown RBP18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 ZNF486Q96H40 463 aaPredicted RBP18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 MDFIQ99750 246 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 C1RLQ9NZP8 487 aa18.49■□□□□ 0.55
SMARCD1-203ENST00000547247 LINC00854A0A1B0GVQ3 168 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 NCBP2LA6PVI3 153 aaKnown RBP18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 PGLYRP1O75594 196 aaPredicted RBP18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 IGKV1-16P04430 117 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 SURF2Q15527 256 aaPredicted RBP18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 PHLDA2Q53GA4 152 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 OR13C8Q8NGS7 320 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 RITA1Q96K30 269 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 RNF5Q99942 180 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 NPFFR1Q9GZQ6 430 aa18.48■□□□□ 0.55
SMARCD1-203ENST00000547247 NAP1L6A6NFF2 107 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 RNF212BA8MTL3 300 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 FGF16O43320 207 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 FCGR3BO75015 233 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 RPS16P62249 146 aaKnown RBP18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 MMDQ15546 238 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 ABCA11PQ4W5N1 156 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 TMEM158Q8WZ71 300 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 C7orf50Q9BRJ6 194 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms