RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GSTZ1O43708 216 aaPredicted RBP11.49□□□□□ -0.57
DDX54-203ENST00000546869 NDUFA3O95167 84 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 IGHG2P01859 326 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 APOA2P02652 100 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 PMP2P02689 132 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 AADACP22760 399 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 PTBP1P26599 531 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX54-203ENST00000546869 HLA-DMAP28067 261 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 S100A5P33763 92 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 HRH1P35367 487 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 F2RL1P55085 397 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 EIF4EBP1Q13541 118 aaPredicted RBP11.49□□□□□ -0.57
DDX54-203ENST00000546869 IL18Q14116 193 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 FAM131AQ6UXB0 335 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
DDX54-203ENST00000546869 Q6ZS46 218 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 DRAXINQ8NBI3 349 aaPredicted RBP11.49□□□□□ -0.57
DDX54-203ENST00000546869 OR6F1Q8NGZ6 308 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
DDX54-203ENST00000546869 SMIM4Q8WVI0 70 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 RITA1Q96K30 269 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 EHFQ9NZC4 300 aa11.49□□□□□ -0.57
DDX54-203ENST00000546869 TENM1Q9UKZ4 2725 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 FABP12A6NFH5 140 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 NBR2O15453 112 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 CD74P04233 296 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 FCER2P06734 321 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 LGALS7P47929 136 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 MMDQ15546 238 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 FOXB2Q5VYV0 432 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 TMEM229BQ8NBD8 167 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 MOB3AQ96BX8 217 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 FLYWCH2Q96CP2 140 aaKnown RBP11.48□□□□□ -0.57
DDX54-203ENST00000546869 HSD17B10Q99714 261 aaKnown RBP11.48□□□□□ -0.57
DDX54-203ENST00000546869 CITED1Q99966 193 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 RASL11BQ9BPW5 248 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 TAS2R8Q9NYW2 309 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 SIGLEC9Q9Y336 463 aa11.48□□□□□ -0.57
DDX54-203ENST00000546869 A6NHS1 94 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 H7C2Y5 167 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 SPDEFO95238 335 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 IGKV1-16P04430 117 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 ETV6P41212 452 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 VDAC2P45880 294 aaPredicted RBP11.47□□□□□ -0.57
DDX54-203ENST00000546869 LINC00205P59089 165 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 CCDC190Q86UF4 302 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 ARRDC1Q8N5I2 433 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 ZNF2Q9BSG1 426 aaPredicted RBP11.47□□□□□ -0.57
DDX54-203ENST00000546869 SLC35D1Q9NTN3 355 aa11.47□□□□□ -0.57
DDX54-203ENST00000546869 LINC00473A8K010 186 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 J3QRK9 145 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 KCNAB3O43448 404 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 HLA-DRB1P01911 266 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 CSF1P09603 554 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 GNRHRP30968 328 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 UCP3P55916 312 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 TAS2R19P59542 299 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 KRTAP10-3P60369 221 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 TSPAN5P62079 268 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 DGCR2P98153 550 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 CBX3Q13185 183 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 C5orf64Q2M2E5 130 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 LPCAT3Q6P1A2 487 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 MFSD4AQ8N468 514 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 BVESQ8NE79 360 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 OR6Q1Q8NGQ2 317 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 SECTM1Q8WVN6 248 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.57
DDX54-203ENST00000546869 SLC5A7Q9GZV3 580 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 CCL28Q9NRJ3 127 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 KIAA1456Q9P272 454 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
DDX54-203ENST00000546869 HAX1O00165 279 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 RRHO14718 337 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 CD3DP04234 171 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 CNTFRP26992 372 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 HERV-K104P61576 105 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 RPS16P62249 146 aaKnown RBP11.45□□□□□ -0.58
DDX54-203ENST00000546869 PSG5Q15238 335 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 ARSJQ5FYB0 599 aaPredicted RBP11.45□□□□□ -0.58
DDX54-203ENST00000546869 RNASE10Q5GAN6 216 aaKnown RBP11.45□□□□□ -0.58
DDX54-203ENST00000546869 LIN54Q6MZP7 749 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 TMEM17Q86X19 198 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
DDX54-203ENST00000546869 V9GYH0 126 aa11.45□□□□□ -0.58
DDX54-203ENST00000546869 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
DDX54-203ENST00000546869 PEX14O75381 377 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 IGLV2-23P01705 113 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 IFNA6P05013 189 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 IGF1P05019 195 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 FXYD4P59646 89 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms