RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ARL16Q0P5N6 197 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 OR5D13Q8NGL4 314 aa9.86□□□□□ -0.83
CCDC38-202ENST00000546386 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 A0A1B0GWJ7 208 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 LRRC30A6NM36 301 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 E5RGE8 158 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 IGKV1-16P04430 117 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 PAX9P55771 341 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 UBA52P62987 128 aaKnown RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM200BQ69YZ2 307 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM182Q6ZP80 229 aaPredicted RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF788Q6ZQV5 615 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 Q8TCH9 128 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 REG4Q9BYZ8 158 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 NGBQ9NPG2 151 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 POMT1Q9Y6A1 747 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 LINC00862A6NCI5 91 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 CRYZL1O95825 349 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 ACAA1P09110 424 aaPredicted RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 GZMHP20718 246 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TUBG1P23258 451 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 SRSF7Q16629 238 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 ZNF561Q8N587 486 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TUBG2Q9NRH3 451 aa9.85□□□□□ -0.83
CCDC38-202ENST00000546386 TET2Q6N021 2002 aaPredicted RBP9.85□□□□□ -0.83
CCDC38-202ENST00000546386 KBTBD11-OT1A0A1B0GTJ5 212 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
CCDC38-202ENST00000546386 GATA4P43694 442 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 AKIRIN2Q53H80 203 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 LURAP1Q96LR2 239 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 EGLN1Q9GZT9 426 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 IFI27L2Q9H2X8 130 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 RHOFQ9HBH0 211 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 NAV2Q8IVL1 2488 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 PRH1P02810 166 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 RND3P61587 244 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 HFEQ30201 348 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 C14orf79Q96F83 325 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 RSG1Q9BU20 258 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 UBTD1Q9HAC8 227 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 FBXO7Q9Y3I1 522 aa9.84□□□□□ -0.83
CCDC38-202ENST00000546386 APOC3P02656 99 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 OR9G9P0C7N8 305 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 FAM157CP0CG43 387 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 CFHR2P36980 270 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 OR10Z1Q8NGY1 313 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 BBC3Q96PG8 261 aaPredicted RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 QTRT1Q9BXR0 403 aaKnown RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 GFOD1Q9NXC2 390 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 PFDN2Q9UHV9 154 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 MXRA5Q9NR99 2828 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 TEX15Q9BXT5 2789 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 SETD2Q9BYW2 2564 aaPredicted RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 DOPEY2Q9Y3R5 2298 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 CD24P25063 80 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 DUTP33316 252 aaKnown RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 ID3Q02535 119 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 TFF3Q07654 80 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 C1orf174Q8IYL3 243 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 PPP1R35Q8TAP8 253 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 NRGNQ92686 78 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 MS4A5Q9H3V2 200 aa9.83□□□□□ -0.84
CCDC38-202ENST00000546386 BARX1Q9HBU1 254 aaPredicted RBP9.83□□□□□ -0.84
CCDC38-202ENST00000546386 TRAV38-1A0A0B4J264 116 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 MFSD2BA6NFX1 497 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 PPIHO43447 177 aaKnown RBP9.82□□□□□ -0.84
CCDC38-202ENST00000546386 IFNA17P01571 189 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 LYL1P12980 280 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 SLC25A24Q6NUK1 477 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 ATRAIDQ6UW56 229 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 H2BFWTQ7Z2G1 175 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 SDSLQ96GA7 329 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 AUP1Q9Y679 476 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 SONP18583 2426 aaKnown RBP9.82□□□□□ -0.84
CCDC38-202ENST00000546386 H7C2Y5 167 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 SYNGR2O43760 224 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 SOX15O60248 233 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 M6PRP20645 277 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 COX7A1P24310 79 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 CEBPGP53567 150 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 ZNF672Q499Z4 452 aaPredicted RBP9.82□□□□□ -0.84
CCDC38-202ENST00000546386 BPIFCQ8NFQ6 507 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 ASB13Q8WXK3 278 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 FAM122AQ96E09 287 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 RBKSQ9H477 322 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 LPAR2Q9HBW0 351 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 OR6C3Q9NZP0 311 aa9.82□□□□□ -0.84
CCDC38-202ENST00000546386 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
CCDC38-202ENST00000546386 NPIPB11E5RHQ5 1161 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 WNT2P09544 360 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms