RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 OR10J5Q8NHC4 309 aa17.61■□□□□ 0.41
CHD4-214ENST00000545942 CASTOR1Q8WTX7 329 aa17.61■□□□□ 0.41
CHD4-214ENST00000545942 FLYWCH2Q96CP2 140 aaKnown RBP17.61■□□□□ 0.41
CHD4-214ENST00000545942 CABLES2Q9BTV7 478 aa17.61■□□□□ 0.41
CHD4-214ENST00000545942 ALX4Q9H161 411 aaPredicted RBP17.61■□□□□ 0.41
CHD4-214ENST00000545942 RAB26Q9ULW5 256 aa17.61■□□□□ 0.41
CHD4-214ENST00000545942 ZNF256Q9Y2P7 627 aaPredicted RBP17.61■□□□□ 0.41
CHD4-214ENST00000545942 LINC01619G3V211 115 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 DIRAS3O95661 229 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 LGALS1P09382 135 aaKnown RBP17.6■□□□□ 0.41
CHD4-214ENST00000545942 HIST1H1DP16402 221 aaKnown RBP17.6■□□□□ 0.41
CHD4-214ENST00000545942 GNB3P16520 340 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 RAB3BP20337 219 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 RAB6AP20340 208 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 GALP22466 123 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 CD40LGP29965 261 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 LFNGQ8NES3 379 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 DCUN1D4Q92564 292 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 SLC35D1Q9NTN3 355 aa17.6■□□□□ 0.41
CHD4-214ENST00000545942 COL7A1Q02388 2944 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 TRBV6-7A0A0A0MS04 114 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 METTL21EPA6NDL7 271 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 RAB27BO00194 218 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 MFNGO00587 321 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 OVOL1O14753 267 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 OR8U9P0C7N5 309 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 GSTT2P0CG29 244 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 GSTT2BP0CG30 244 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 ARPC1AQ92747 370 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 OR2D2Q9H210 308 aa17.59■□□□□ 0.41
CHD4-214ENST00000545942 A0A075B6Q4 140 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 SLC25A17O43808 307 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 MRPS14O60783 128 aaKnown RBP17.58■□□□□ 0.4
CHD4-214ENST00000545942 NHLRC4P0CG21 123 aaPredicted RBP17.58■□□□□ 0.4
CHD4-214ENST00000545942 SNRPBP14678 240 aaKnown RBP17.58■□□□□ 0.4
CHD4-214ENST00000545942 GABARAPL2P60520 117 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 ZNF429Q86V71 674 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 MAFIPQ8WZ33 124 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 DLX4Q92988 240 aaPredicted RBP17.58■□□□□ 0.4
CHD4-214ENST00000545942 SLA2Q9H6Q3 261 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.58■□□□□ 0.41e-7■■■■□ 26.7
CHD4-214ENST00000545942 TPSG1Q9NRR2 321 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 SDHAF2Q9NX18 166 aa17.58■□□□□ 0.4
CHD4-214ENST00000545942 SLURP1P55000 103 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 FXYD3Q14802 87 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 C22orf42Q6IC83 251 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 GRPEL2Q8TAA5 225 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 WWC2-AS2Q96NR7 200 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 MS4A10Q96PG2 267 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 CENPOQ9BU64 300 aa17.57■□□□□ 0.4
CHD4-214ENST00000545942 ZNF230Q9UIE0 474 aaPredicted RBP17.57■□□□□ 0.4
CHD4-214ENST00000545942 A0A0B4J203 849 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 LY86O95711 162 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 TALDO1P37837 337 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 LGALS7P47929 136 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 TPPP2P59282 170 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 TAGLNQ01995 201 aaKnown RBP17.56■□□□□ 0.4
CHD4-214ENST00000545942 ARFRP1Q13795 201 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 NR2C2APQ86WQ0 139 aa17.56■□□□□ 0.4
CHD4-214ENST00000545942 RBM7Q9Y580 266 aaKnown RBP17.56■□□□□ 0.4
CHD4-214ENST00000545942 IGHV4OR15-8A0A075B7B6 117 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 A0A087WW49 117 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 ARPC1BO15143 372 aaKnown RBP17.55■□□□□ 0.4
CHD4-214ENST00000545942 SAP30O75446 220 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 IGHV3-11P01762 117 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 HSPB1P04792 205 aaKnown RBP17.55■□□□□ 0.4
CHD4-214ENST00000545942 CBX3Q13185 183 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 ARL6IP1Q15041 203 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 SRSF7Q16629 238 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHD4-214ENST00000545942 UBE2UQ5VVX9 321 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 HARBI1Q96MB7 349 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 GINS4Q9BRT9 223 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 ATG5Q9H1Y0 275 aa17.55■□□□□ 0.4
CHD4-214ENST00000545942 CNIH1O95406 144 aa17.54■□□□□ 0.4
CHD4-214ENST00000545942 IGLV2-23P01705 113 aa17.54■□□□□ 0.4
CHD4-214ENST00000545942 TRGV3P03979 118 aa17.54■□□□□ 0.4
CHD4-214ENST00000545942 Q6ZS49 121 aa17.54■□□□□ 0.4
CHD4-214ENST00000545942 RHOVQ96L33 236 aa17.54■□□□□ 0.4
CHD4-214ENST00000545942 SSBP2P81877 361 aaPredicted RBP17.53■□□□□ 0.4
CHD4-214ENST00000545942 RTL8BQ17RB0 113 aa17.53■□□□□ 0.4
CHD4-214ENST00000545942 POC5Q8NA72 575 aa17.53■□□□□ 0.4
CHD4-214ENST00000545942 C5orf30Q96GV9 206 aa17.53■□□□□ 0.4
CHD4-214ENST00000545942 ZNF355PQ9NSJ1 428 aa17.53■□□□□ 0.4
CHD4-214ENST00000545942 SMIM30A4D0T7 59 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 H3BUA1 57 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 SHOXO15266 292 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 CRYGBP07316 175 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 RRASP10301 218 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 DTYMKP23919 212 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 PSMB9P28065 219 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 FGF9P31371 208 aaPredicted RBP17.52■□□□□ 0.4
CHD4-214ENST00000545942 PJVKQ0ZLH3 352 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 TMEM177Q53S58 311 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 ACSM6Q6P461 480 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 SPARTQ8N0X7 666 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 BVESQ8NE79 360 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 FCGR1BQ92637 280 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 SMAD5-AS1Q9Y6J3 95 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 U3KQK5 164 aa17.52■□□□□ 0.4
CHD4-214ENST00000545942 NOTOA8MTQ0 251 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms