RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 GABARAPL2P60520 117 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 ARFRP1Q13795 201 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 MOGAT2Q3SYC2 334 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 AKIRIN2Q53H80 203 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 PRR25Q96S07 402 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 FAM103A1Q9BTL3 118 aaKnown RBP15.43■□□□□ 0.06
CHD4-213ENST00000545584 TOLLIPQ9H0E2 274 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 SLC35D1Q9NTN3 355 aa15.43■□□□□ 0.06
CHD4-213ENST00000545584 RBM7Q9Y580 266 aaKnown RBP15.43■□□□□ 0.06
CHD4-213ENST00000545584 SHISA3A0PJX4 238 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 RAB27BO00194 218 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 OVOL1O14753 267 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 DIRAS3O95661 229 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 OR8U9P0C7N5 309 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 GSTT2P0CG29 244 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 GSTT2BP0CG30 244 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 EGR2P11161 476 aaPredicted RBP15.42■□□□□ 0.06
CHD4-213ENST00000545584 HIST1H1DP16402 221 aaKnown RBP15.42■□□□□ 0.06
CHD4-213ENST00000545584 CBX3Q13185 183 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 ARL6IP1Q15041 203 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 ASPHD1Q5U4P2 390 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 C22orf42Q6IC83 251 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 LFNGQ8NES3 379 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 CASTOR1Q8WTX7 329 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 DCUN1D4Q92564 292 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 GINS4Q9BRT9 223 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 CABLES2Q9BTV7 478 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 OR2D2Q9H210 308 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 GAB2Q9UQC2 676 aa15.42■□□□□ 0.06
CHD4-213ENST00000545584 LINC01619G3V211 115 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 MFNGO00587 321 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 SLC25A17O43808 307 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 LGALS1P09382 135 aaKnown RBP15.41■□□□□ 0.06
CHD4-213ENST00000545584 LINC00205P59089 165 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 IGSF11Q5DX21 431 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 ZNF429Q86V71 674 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 ARPC1AQ92747 370 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 Q9H521 79 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 SLA2Q9H6Q3 261 aa15.41■□□□□ 0.06
CHD4-213ENST00000545584 ZNF256Q9Y2P7 627 aaPredicted RBP15.41■□□□□ 0.06
CHD4-213ENST00000545584 TRBV6-7A0A0A0MS04 114 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 CNIH1O95406 144 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 LY86O95711 162 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 LGALS7P47929 136 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 TPPP2P59282 170 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 TAGLNQ01995 201 aaKnown RBP15.4■□□□□ 0.06
CHD4-213ENST00000545584 FXYD3Q14802 87 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 GRPEL2Q8TAA5 225 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 MS4A10Q96PG2 267 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 ALX4Q9H161 411 aaPredicted RBP15.4■□□□□ 0.06
CHD4-213ENST00000545584 ATG5Q9H1Y0 275 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■■■□ 26.7
CHD4-213ENST00000545584 SDHAF2Q9NX18 166 aa15.4■□□□□ 0.06
CHD4-213ENST00000545584 ZNF230Q9UIE0 474 aaPredicted RBP15.4■□□□□ 0.06
CHD4-213ENST00000545584 LSM4Q9Y4Z0 139 aaKnown RBP15.4■□□□□ 0.06
CHD4-213ENST00000545584 A0A0B4J203 849 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 NHLRC4P0CG21 123 aaPredicted RBP15.39■□□□□ 0.05
CHD4-213ENST00000545584 PSMB9P28065 219 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 SRSF7Q16629 238 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHD4-213ENST00000545584 RTL8BQ17RB0 113 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 MAFIPQ8WZ33 124 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 FCGR1BQ92637 280 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 ZNF355PQ9NSJ1 428 aa15.39■□□□□ 0.05
CHD4-213ENST00000545584 SAP30O75446 220 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 IGHV3-11P01762 117 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 HSPB1P04792 205 aaKnown RBP15.38■□□□□ 0.05
CHD4-213ENST00000545584 RRASP10301 218 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 SLURP1P55000 103 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 UBE2UQ5VVX9 321 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 DLX4Q92988 240 aaPredicted RBP15.38■□□□□ 0.05
CHD4-213ENST00000545584 HARBI1Q96MB7 349 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 TPSG1Q9NRR2 321 aa15.38■□□□□ 0.05
CHD4-213ENST00000545584 IGHV4OR15-8A0A075B7B6 117 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 A0A087WW49 117 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 SMIM30A4D0T7 59 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 NOTOA8MTQ0 251 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 ARPC1BO15143 372 aaKnown RBP15.37■□□□□ 0.05
CHD4-213ENST00000545584 SHOXO15266 292 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 TRGV3P03979 118 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 Q6ZS49 121 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 SPARTQ8N0X7 666 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 ADTRPQ96IZ2 230 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 WWC2-AS2Q96NR7 200 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 STUB1Q9UNE7 303 aa15.37■□□□□ 0.05
CHD4-213ENST00000545584 H3BUA1 57 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 DTYMKP23919 212 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 FGF9P31371 208 aaPredicted RBP15.36■□□□□ 0.05
CHD4-213ENST00000545584 TPRA1Q86W33 373 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 POC5Q8NA72 575 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 BVESQ8NE79 360 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 RHOVQ96L33 236 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 TMEM68Q96MH6 324 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 YTHDF1Q9BYJ9 559 aaKnown RBP15.36■□□□□ 0.05
CHD4-213ENST00000545584 TXNL4BQ9NX01 149 aaKnown RBP15.36■□□□□ 0.05
CHD4-213ENST00000545584 SSR3Q9UNL2 185 aa15.36■□□□□ 0.05
CHD4-213ENST00000545584 C13orf42A0A1B0GVH6 325 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 SCGNO76038 276 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 IGLV2-23P01705 113 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 SNRPBP14678 240 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms