RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
LTBR-214ENST00000545445 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
LTBR-214ENST00000545445 ZNF486Q96H40 463 aaPredicted RBP9.53□□□□□ -0.88
LTBR-214ENST00000545445 ZNF251Q9BRH9 671 aa9.53□□□□□ -0.88
LTBR-214ENST00000545445 SDHAF2Q9NX18 166 aa9.53□□□□□ -0.88
LTBR-214ENST00000545445 A0A1W2PPI3 338 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 OR5H14A6NHG9 310 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 J3QRK9 145 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 M0R1X1 148 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 GPR31O00270 319 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 CD1BP29016 333 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 GNRHRP30968 328 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 MC5RP33032 325 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 THBS3P49746 956 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 FAAP20Q6NZ36 180 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 ZNF66Q6ZN08 573 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 IDO2Q6ZQW0 420 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 DYNAPQ8N1N2 210 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 BVESQ8NE79 360 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 HSD17B10Q99714 261 aaKnown RBP9.52□□□□□ -0.89
LTBR-214ENST00000545445 SSX3Q99909 188 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 NABP2Q9BQ15 211 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 SLC25A21Q9BQT8 299 aaPredicted RBP9.52□□□□□ -0.89
LTBR-214ENST00000545445 PITPNC1Q9UKF7 332 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 POMT1Q9Y6A1 747 aa9.52□□□□□ -0.89
LTBR-214ENST00000545445 FAM90A9PA6NNJ1 464 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 TIMM23O14925 209 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 PROP1O75360 226 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 FAM106CPP0CH98 169 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 RRASP10301 218 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 PGAM2P15259 253 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
LTBR-214ENST00000545445 IER3P46695 156 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 REG1BP48304 166 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 RAB13P51153 203 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 SRSF4Q08170 494 aaKnown RBP9.51□□□□□ -0.89
LTBR-214ENST00000545445 DIAPH2-AS1Q14236 149 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 RPL39P5Q59GN2 51 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 MZT2BQ6NZ67 158 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 OR5AN1Q8NGI8 311 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 CFHR4Q92496 578 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 ZNF48Q96MX3 618 aaPredicted RBP9.51□□□□□ -0.89
LTBR-214ENST00000545445 RSRP1Q9BUV0 290 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 MRPL20Q9BYC9 149 aaKnown RBP9.51□□□□□ -0.89
LTBR-214ENST00000545445 FXYD6Q9H0Q3 95 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 CCL28Q9NRJ3 127 aa9.51□□□□□ -0.89
LTBR-214ENST00000545445 SOX21Q9Y651 276 aaPredicted RBP9.51□□□□□ -0.89
LTBR-214ENST00000545445 CLDN34H7C241 214 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 PLA2G10O15496 165 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 LYRM1O43325 122 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 IGLV2-14P01704 120 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 APOA2P02652 100 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 CTSDP07339 412 aaPredicted RBP9.5□□□□□ -0.89
LTBR-214ENST00000545445 RNASE1P07998 156 aaKnown RBP9.5□□□□□ -0.89
LTBR-214ENST00000545445 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
LTBR-214ENST00000545445 DEFA1P59665 94 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 DEFA3P59666 94 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 RND3P61587 244 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 BAMBIQ13145 260 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 CATR1Q13166 79 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 CBX3Q13185 183 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 ASAH1Q13510 395 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 RBMS2Q15434 407 aaKnown RBP9.5□□□□□ -0.89
LTBR-214ENST00000545445 C16orf87Q6PH81 154 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 ZNF818PQ6ZRF7 136 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 TCTEX1D1Q8N7M0 179 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 OR13C8Q8NGS7 320 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 PALMDQ9NP74 551 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 C14orf166Q9Y224 244 aaKnown RBP9.5□□□□□ -0.89
LTBR-214ENST00000545445 PRELID3BQ9Y3B1 194 aa9.5□□□□□ -0.89
LTBR-214ENST00000545445 LINC00854A0A1B0GVQ3 168 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 MDFIC2A0A1B0GVS7 189 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 H3BUX3 64 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 KIR2DS2P43631 304 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 EIF4EBP1Q13541 118 aaPredicted RBP9.49□□□□□ -0.89
LTBR-214ENST00000545445 EBI3Q14213 229 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 RTL8BQ17RB0 113 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 ABCA11PQ4W5N1 156 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 DHRS7BQ6IAN0 325 aaPredicted RBP9.49□□□□□ -0.89
LTBR-214ENST00000545445 KCTD9Q7L273 389 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 C16orf82Q7Z2V1 217 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 PDPNQ86YL7 162 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 C1QL4Q86Z23 238 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 CCDC71LQ8N9Z2 235 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 ZNF383Q8NA42 475 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 POC5Q8NA72 575 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 OR2T10Q8NGZ9 312 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 MARCH1Q8TCQ1 289 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 CD300LFQ8TDQ1 290 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 CAPSLQ8WWF8 208 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 C5orf30Q96GV9 206 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 RNF5Q99942 180 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 RAB18Q9NP72 206 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms