RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GALR2O43603 387 aaPredicted RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 GNG10P50151 68 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 PLP1P60201 277 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SRSF3P84103 164 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 TNFAIP6P98066 277 aaPredicted RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 HFEQ30201 348 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 FAM214BQ7L5A3 538 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 WDFY1Q8IWB7 410 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 REPIN1Q9BWE0 567 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 DOK5Q9P104 306 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TMEM131Q92545 1883 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1-27A0A075B6S5 117 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TRBV6-7A0A0A0MS04 114 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 C5orf63A6NC05 138 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 C1QL1O75973 258 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 LYL1P12980 280 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 ATRAIDQ6UW56 229 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 MRPL30Q8TCC3 161 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 TXNDC17Q9BRA2 123 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 CISD1Q9NZ45 108 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 ZDHHC8Q9ULC8 765 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 LY6G6EA0A0G2JKS1 128 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SMPD2O60906 423 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 HBZP02008 142 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 OR5G3P0C626 314 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 BCL2P10415 239 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 HTR1DP28221 377 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 CEBPDP49716 269 aaPredicted RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 ERVFRD-1P60508 538 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SUPT4H1P63272 117 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 Q0VFX4 171 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS50-220ENST00000544910 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SAPCD1Q5SSQ6 148 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 GLRX5Q86SX6 157 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 OR8G5Q8NG78 346 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 PLPPR2Q96GM1 343 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TMEM56Q96MV1 263 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 GPHA2Q96T91 129 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TMEM56-RWDD3S4R434 201 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 U3KQA8 63 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 LINC00587B1AMM8 73 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 FABP2P12104 132 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 PPP1CCP36873 323 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 B3GALT5-AS1P59052 145 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 C16orf82Q7Z2V1 217 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 MOGAT3Q86VF5 341 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 OR4S2Q8NH73 311 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 FGFBP3Q8TAT2 258 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 LRFN3Q9BTN0 628 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 CLN8Q9UBY8 286 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 WIPI2Q9Y4P8 454 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 IGHV3OR15-7A0A075B7D8 119 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 FAM87AP0C7U9 286 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 SERF2P84101 59 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 TMEM183AQ8IXX5 376 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 CYB561D1Q8N8Q1 229 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 RSG1Q9BU20 258 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 OPN3Q9H1Y3 402 aaPredicted RBP4.93□□□□□ -1.62
VPS50-220ENST00000544910 TUBA4BQ9H853 241 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 CDC42EP3Q9UKI2 254 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 MEX3AA1L020 520 aaKnown RBP4.93□□□□□ -1.62
VPS50-220ENST00000544910 FAM90A26D6RGX4 464 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 E9PLN8 166 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 BMPERQ8N8U9 685 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 BCL2L2Q92843 193 aaPredicted RBP4.93□□□□□ -1.62
VPS50-220ENST00000544910 CTXND1A0A1B0GTU2 59 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 PRR33A8MZF0 331 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 ISLRO14498 428 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 APCSP02743 223 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 GZMHP20718 246 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 FHITP49789 147 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 TGIF1Q15583 401 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 ATP1A1-AS1Q5TC04 95 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 LYG1Q8N1E2 194 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 ADTRPQ96IZ2 230 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 PMCHL2Q9BQD1 86 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 COMMD5Q9GZQ3 224 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 GP6Q9HCN6 339 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 SH2D2AQ9NP31 389 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 ZNF835Q9Y2P0 537 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 PRDX2P32119 198 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 LRRC10Q5BKY1 277 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 OR1L1Q8NH94 360 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 GAL3ST2Q9H3Q3 398 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 TIMM9Q9Y5J7 89 aa4.93□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1-12A0A0C4DH73 117 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 C3orf80F5H4A9 247 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 RAB29O14966 203 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 HPRT1P00492 218 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1D-12P01611 117 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 GNB1P62873 340 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 C1orf185Q5T7R7 199 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 ZNF880Q6PDB4 577 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 LRTM2Q8N967 370 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 OR4D5Q8NGN0 318 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 KLF14Q8TD94 323 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms