RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 NFE4Q86UQ8 179 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 CPOQ8IVL8 374 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 GBGT1Q8N5D6 347 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 AQP11Q8NBQ7 271 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 CLRN3Q8NCR9 226 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 OR5D18Q8NGL1 313 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 PYURFQ96I23 114 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 NR1H4Q96RI1 486 aaPredicted RBP4.64□□□□□ -1.67
CIT-215ENST00000544800 IL1RAPQ9NPH3 570 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 FAM118AQ9NWS6 357 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 PUS1Q9Y606 427 aaKnown RBP eCLIP4.64□□□□□ -1.67
CIT-215ENST00000544800 R4GMQ9 66 aa4.64□□□□□ -1.67
CIT-215ENST00000544800 TRBV5-7A0A0A0MS05 114 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 TRAV24A0A0B4J272 114 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 FAM90A7PA6NKC0 464 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 FAM90A23PA8MXZ1 464 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 SYT7O43581 403 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 KDM4BO94953 1096 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 RPP14O95059 124 aaKnown RBP4.63□□□□□ -1.67
CIT-215ENST00000544800 CCNB2O95067 398 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 SERPINA3P01011 423 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 SPP1P10451 314 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 CCL1P22362 96 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 MAGEA2P43356 314 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 WDR93Q6P2C0 686 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 CSNK1G2-AS1Q8NCQ2 148 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 TEX47Q8TBZ9 253 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 DYDC1Q8WWB3 177 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 ARL11Q969Q4 196 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 FAM46BQ96A09 425 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 MCUR1Q96AQ8 359 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 UPK3BQ9BT76 320 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 ALG8Q9BVK2 526 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 MOB1AQ9H8S9 216 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 TMBIM4Q9HC24 238 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 NEK6Q9HC98 313 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 SAR1AQ9NR31 198 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 DKK2Q9UBU2 259 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 EXOSC1Q9Y3B2 195 aaKnown RBP4.63□□□□□ -1.67
CIT-215ENST00000544800 UFC1Q9Y3C8 167 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 SNX5Q9Y5X3 404 aa4.63□□□□□ -1.67
CIT-215ENST00000544800 TRBV9A0A0B4J1U6 114 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 H3BN98 237 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 C15orf65H3BRN8 121 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 KRT36O76013 467 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ATF1P18846 271 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 SLC2A5P22732 501 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 GNRHRP30968 328 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ARL3P36405 182 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ZNF134P52741 427 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 HMGA2P52926 109 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 EMP1P54849 157 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 CXCR4P61073 352 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 RPL37AP61513 92 aaKnown RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 CT45A1Q5HYN5 189 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 SLC35D3Q5M8T2 416 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ZNF322Q6U7Q0 402 aaPredicted RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 STHQ8IWL8 128 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ZNF439Q8NDP4 499 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 CT45A3Q8NHU0 189 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 CCDC107Q8WV48 283 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ASB17Q8WXJ9 295 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 ADAT3Q96EY9 351 aaPredicted RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 C16orf92Q96LL3 132 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 NIPSNAP1Q9BPW8 284 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 SULT4A1Q9BR01 284 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 MRPL20Q9BYC9 149 aaKnown RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 SMPD3Q9NY59 655 aaPredicted RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 ZNF581Q9P0T4 197 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 METTL1Q9UBP6 276 aaKnown RBP4.62□□□□□ -1.67
CIT-215ENST00000544800 HSF4Q9ULV5 492 aa4.62□□□□□ -1.67
CIT-215ENST00000544800 TRAV3A0A0B4J244 114 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 CCDC182A6NF36 153 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 EDF1O60869 148 aaKnown RBP4.61□□□□□ -1.67
CIT-215ENST00000544800 GMNNO75496 209 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 APOL3O95236 402 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 CTSDP07339 412 aaPredicted RBP4.61□□□□□ -1.67
CIT-215ENST00000544800 IGFBP3P17936 291 aaPredicted RBP4.61□□□□□ -1.67
CIT-215ENST00000544800 PRKACBP22694 351 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 GINS1Q14691 196 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 PSG5Q15238 335 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 FAM222AQ5U5X8 452 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 ZNF773Q6PK81 442 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 UNQ9165/PRO28630Q6UXU0 137 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 CNIH3Q8TBE1 160 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 C10orf35Q96D05 121 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 OPALINQ96PE5 141 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 RNF5Q99942 180 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 HOPXQ9BPY8 73 aaPredicted RBP4.61□□□□□ -1.67
CIT-215ENST00000544800 ADI1Q9BV57 179 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 DPH3P1Q9H4G8 78 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 GORASP2Q9H8Y8 452 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 CLEC5AQ9NY25 188 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 CACNG5Q9UF02 275 aa4.61□□□□□ -1.67
CIT-215ENST00000544800 LOC107986453A0A1B0GWG9 222 aa4.6□□□□□ -1.67
CIT-215ENST00000544800 RBBP9O75884 186 aa4.6□□□□□ -1.67
CIT-215ENST00000544800 FADS2O95864 444 aaKnown RBP4.6□□□□□ -1.67
CIT-215ENST00000544800 OR9G9P0C7N8 305 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms