RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	IFNA6	P05013	189 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR9G9	P0C7N8	305 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	NCK1	P16333	377 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF3	P17036	446 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	CD34	P28906	385 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TMEM187	Q14656	261 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	GRK1	Q15835	563 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	HLA-DRB5	Q30154	266 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TPTE2P1	Q5T6R2	138 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	ADAMTSL5	Q6ZMM2	481 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TRAPPC6B	Q86SZ2	158 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	SLC38A6	Q8IZM9	456 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	STXBP6	Q8NFX7	210 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR11H1	Q8NG94	326 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR8B12	Q8NGG6	310 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR4D6	Q8NGJ1	314 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TMEM190	Q8WZ59	177 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	RPE	Q96AT9	228 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	RCN3	Q96D15	328 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	DUX3	Q96PT4	197 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	AMELY	Q99218	206 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TM2D3	Q9BRN9	247 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	CABLES2	Q9BTV7	478 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	MRO	Q9BYG7	248 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	MAGT1	Q9H0U3	335 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	EDA2R	Q9HAV5	297 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	CMC2	Q9NRP2	79 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	THYN1	Q9P016	225 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	LINC00527	Q9UJ94	153 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	SLC7A11	Q9UPY5	501 aa		4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.64	□□□□□ -1.67
CPSF7-222	ENST00000544585	TRAV26-1	A0A087WT03	109 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MEX3A	A1L020	520 aa	Known RBP	4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MFSD2B	A6NFX1	497 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MPZL2	O60487	215 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF254	O75437	659 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MMP23A	O75900	390 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGLV2-11	P01706	119 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGLV3-1	P01715	115 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	FABP3	P05413	133 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR8U8	P0C7N1	319 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	ALOX5AP	P20292	161 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	GABRR1	P24046	479 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	CDK2	P24941	298 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	CDC42	P60953	191 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	EBI3	Q14213	229 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	HES1	Q14469	280 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	EDDM3A	Q14507	147 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF876P	Q49A33	203 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MUC21	Q5SSG8	566 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	TMEM42	Q69YG0	159 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	CGB2	Q6NT52	195 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	KCNIP4	Q6PIL6	250 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	TCF23	Q7RTU1	214 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	ANGPTL5	Q86XS5	388 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585		Q8IYB0	196 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	FAM71E2	Q8N5Q1	922 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	C5orf56	Q8N8D9	126 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR1N2	Q8NGR9	330 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR51E1	Q8TCB6	317 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	C4orf3	Q8WVX3	66 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	CEP19	Q96LK0	163 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	TEAD3	Q99594	435 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	PBOV1	Q9GZY1	135 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR51V1	Q9H2C8	321 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	GPR84	Q9NQS5	396 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	PLCXD1	Q9NUJ7	323 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	MTCH1	Q9NZJ7	389 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	PIPOX	Q9P0Z9	390 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	PYGO1	Q9Y3Y4	419 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	HERC2	O95714	4834 aa		4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.63	□□□□□ -1.67
CPSF7-222	ENST00000544585	DHRS7C	A6NNS2	312 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	NCBP2L	A6PVI3	153 aa	Known RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	PRR23D1	E9PI22	279 aa	Predicted RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	TNFRSF11B	O00300	401 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	HAND1	O96004	215 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	SEMG1	P04279	462 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	HMGN1	P05114	100 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	FCGR3A	P08637	254 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR5H8	P0DN80	308 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	COX4I1	P13073	169 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	KIR3DL2	P43630	455 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	RAB7A	P51149	207 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	RUNX1	Q01196	453 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF146	Q15072	292 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ADAMTSL4-AS1	Q5T5F5	129 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	TPRX1	Q8N7U7	411 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF565	Q8N9K5	539 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR8D4	Q8NGM9	314 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR6Q1	Q8NGQ2	317 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR9G1	Q8NH87	305 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	HAVCR2	Q8TDQ0	301 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	C11orf52	Q96A22	123 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	COQ2	Q96H96	371 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms