RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FAM90A13PP0C7W8 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A14PP0C7W9 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A24PP0C7X0 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 BCL2P10415 239 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.66
CHD4-211ENST00000544484 H2BFSP57053 126 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 C10orf128Q5T292 105 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 H1FOOQ8IZA3 346 aaPredicted RBP10.96□□□□□ -0.66
CHD4-211ENST00000544484 SELENOHQ8IZQ5 122 aaKnown RBP10.96□□□□□ -0.66
CHD4-211ENST00000544484 NUDT16L1Q9BRJ7 211 aaKnown RBP10.96□□□□□ -0.66
CHD4-211ENST00000544484 CACNA1DQ01668 2161 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 SERF2P84101 59 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 ZNF660Q6AZW8 331 aaPredicted RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 SLC35E4Q6ICL7 350 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 HIST1H1BP16401 226 aaKnown RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 RND2P52198 227 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 Q5BKY6 102 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 OR4A5Q8NH83 315 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 IL19Q9UHD0 177 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 C19orf35Q6ZS72 473 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 ABHD12Q8N2K0 398 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 ACACAQ13085 2346 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 TMEM14DPA8MWL7 114 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 CFDP00746 253 aaPredicted RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 FAM106CPP0CH98 169 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 HKR1P10072 659 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 COX5BP10606 129 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 SULT1A2P50226 295 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 CSRP2Q16527 193 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 GUCA2BQ16661 112 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 Q6ZT83 130 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 SFXN3Q9BWM7 321 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 CHRNA10Q9GZZ6 450 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 MARCH11A6NNE9 402 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 HIST1H1EP10412 219 aaKnown RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 LY6EQ16553 131 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 FAM74A3Q4VXF1 159 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 SGMS2Q8NHU3 365 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 OR4C12Q96R67 309 aa10.95□□□□□ -0.66
CHD4-211ENST00000544484 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
CHD4-211ENST00000544484 MFSD2BA6NFX1 497 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 NMBP08949 121 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
CHD4-211ENST00000544484 DPPA3Q6W0C5 159 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 MTCL1Q9Y4B5 1905 aaKnown RBP10.94□□□□□ -0.66
CHD4-211ENST00000544484 NPIPB9F8W1W9 429 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 FAM201AQ5SY85 155 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 NRIP2Q9BQI9 281 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 TUBD1Q9UJT1 453 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 ARHGEF17Q96PE2 2063 aaPredicted RBP10.94□□□□□ -0.66
CHD4-211ENST00000544484 SYNGR3O43761 229 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 MED12Q93074 2177 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 KLK2P20151 261 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 HOXA6P31267 233 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 ID4P47928 161 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 MMD2Q8IY49 270 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 PACRGQ96M98 296 aaPredicted RBP10.94□□□□□ -0.66
CHD4-211ENST00000544484 MESP1Q9BRJ9 268 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 DOPEY2Q9Y3R5 2298 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 MFAP2P55001 183 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 MUC15Q8N387 334 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 OR11H4Q8NGC9 324 aa10.94□□□□□ -0.66
CHD4-211ENST00000544484 TAF15Q92804 592 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHD4-211ENST00000544484 ADAM11O75078 769 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 ZNF735P0CB33 412 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 ELOBQ15370 118 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
CHD4-211ENST00000544484 ATP5J2P56134 94 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 TMEM105Q8N8V8 129 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 MRPL37Q9BZE1 423 aaKnown RBP10.93□□□□□ -0.66
CHD4-211ENST00000544484 GSX1Q9H4S2 264 aaPredicted RBP10.93□□□□□ -0.66
CHD4-211ENST00000544484 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 H3BTX0 84 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 IGLV3-19P01714 112 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 TCTAP57738 103 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 ASPHD2Q6ICH7 369 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 OR5P3Q8WZ94 311 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 APCSP02743 223 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 GFRA1P56159 465 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 OR8A1Q8NGG7 326 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 MEOX2P50222 304 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 HOXA4Q00056 320 aaPredicted RBP10.93□□□□□ -0.66
CHD4-211ENST00000544484 IFT22Q9H7X7 185 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 OR2A4O95047 310 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 Q6ZN92 141 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 GTF2H5Q6ZYL4 71 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms