RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GADD45AP24522 165 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 GNB1P62873 340 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CDNFQ49AH0 187 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF562Q6V9R5 426 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PDPNQ86YL7 162 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 Q9H521 79 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RNF167Q9H6Y7 350 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 METTL1Q9UBP6 276 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 VSIG4Q9Y279 399 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SORL1Q92673 2214 aa10.17□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SRRM4A7MD48 611 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 M0R1X1 148 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ARPC1BO15143 372 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SPDEFO95238 335 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CLEC2LP0C7M8 214 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 DTYMKP23919 212 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SDC2P34741 201 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ECSCRQ19T08 205 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 MRGPRG-AS1Q2M3A8 158 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 AKIRIN2Q53H80 203 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 HACD4Q5VWC8 232 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SFXN4Q6P4A7 337 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 H1FOOQ8IZA3 346 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR1N2Q8NGR9 330 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR10J5Q8NHC4 309 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CASTOR1Q8WTX7 329 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ATG5Q9H1Y0 275 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 DAPK2Q9UIK4 370 aa10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 FOXA2Q9Y261 457 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SSX5O60225 188 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CA2P00918 260 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RAB25P57735 213 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 RPS16P62249 146 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 MRPS15P82914 257 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PJVKQ0ZLH3 352 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ARFRP1Q13795 201 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ZNF260Q3ZCT1 412 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TMEM65Q6PI78 240 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 TCTEX1D1Q8N7M0 179 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR5M8Q8NGP6 311 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 DDB2Q92466 427 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 FLYWCH2Q96CP2 140 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 CLCC1Q96S66 551 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 FAM103A1Q9BTL3 118 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 ALX4Q9H161 411 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 OR2D2Q9H210 308 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SLC35D1Q9NTN3 355 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 SSR3Q9UNL2 185 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 A3GALT2U3KPV4 340 aa10.15□□□□□ -0.78
TNFRSF1A-215ENST00000543359 A0A1W2PN81 502 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 SLC25A17O43808 307 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 APOA2P02652 100 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 CHRNA7P36544 502 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 DGCR2P98153 550 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 PLGLAQ15195 96 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 KCTD21Q4G0X4 260 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 TMEM177Q53S58 311 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LFNGQ8NES3 379 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 OR5H6Q8NGV6 325 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LGALS14Q8TCE9 139 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 DPF1Q92782 380 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 OR5B12Q96R08 314 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 CENPOQ9BU64 300 aa10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 RRP15Q9Y3B9 282 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-215ENST00000543359 TMEM235A6NFC5 223 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LINC00473A8K010 186 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 SEC14L6B5MCN3 397 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 IGLV2-14P01704 120 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 TALDO1P37837 337 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LGALS7P47929 136 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 ZNF616Q08AN1 781 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 ACTBL2Q562R1 376 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 C9orf66Q5T8R8 295 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 BVESQ8NE79 360 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 NUDCD2Q8WVJ2 157 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 DCSTAMPQ9H295 470 aa10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-215ENST00000543359 RAMP3O60896 148 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 HLA-DQB1P01920 261 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 LGALS1P09382 135 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 OR8U8P0C7N1 319 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 CD36P16671 472 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 MXD1Q05195 221 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 EIF4EBP1Q13541 118 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 FXYD3Q14802 87 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 NEDD8Q15843 81 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 PYHIN1Q6K0P9 492 aa10.12□□□□□ -0.79
TNFRSF1A-215ENST00000543359 UNQ5815/PRO19632Q6UWF5 114 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms