RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 FGF16O43320 207 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 AMY1AP04745 511 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 AMY2AP04746 511 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 CSF1P09603 554 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 FXYD4P59646 89 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 TSPAN5P62079 268 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 BLCAPP62952 87 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 PYDC2Q56P42 97 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 PRSS22Q9GZN4 317 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 BEX1Q9HBH7 125 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 CCL28Q9NRJ3 127 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 MMP24Q9Y5R2 645 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 A0A1B0GUS0 222 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 H7C2Y5 167 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 RAB3DO95716 219 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 APOA2P02652 100 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 IFNA6P05013 189 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 MDKP21741 143 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 EIF4EBP1Q13541 118 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 STEAP1BQ6NZ63 245 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 C11orf88Q6PI97 169 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 TMEM17Q86X19 198 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 Q8N2B8 174 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 ARRDC1Q8N5I2 433 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 C5orf56Q8N8D9 126 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 ZBTB34Q8NCN2 500 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 LINC01006Q8NI28 216 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 THAP7Q9BT49 309 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 PLSCR3Q9NRY6 295 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 SLC35D1Q9NTN3 355 aa13.63□□□□□ -0.23
RABGGTA-203ENST00000543002 ANKRD20A5PA0PJZ0 165 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 PDPNQ86YL7 162 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 Q8N402 240 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 DDB2Q92466 427 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 RITA1Q96K30 269 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 HSD17B10Q99714 261 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 RNF5Q99942 180 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
RABGGTA-203ENST00000543002 LINC00473A8K010 186 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 AKAIN1P0CW23 69 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 RRASP10301 218 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 GNRHRP30968 328 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 F2RL1P55085 397 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 MEF2DQ14814 521 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 MMDQ15546 238 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 ABCA11PQ4W5N1 156 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF66Q6ZN08 573 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 Q6ZS46 218 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 Q8N9W7 124 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 OR4D10Q8NGI6 311 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 OR2T6Q8NHC8 308 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 TRIM63Q969Q1 353 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 SRRQ9GZT4 340 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 PTTG2Q9NZH5 202 aa13.61□□□□□ -0.23
RABGGTA-203ENST00000543002 IGKV1-16P04430 117 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 UCP3P55916 312 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 RPL30P62888 115 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 RTL8BQ17RB0 113 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 AADACL3Q5VUY0 350 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF818PQ6ZRF7 136 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 KCTD9Q7L273 389 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 LHFPL1Q86WI0 220 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 FAM71E2Q8N5Q1 922 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 BVESQ8NE79 360 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 NPBQ8NG41 125 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 FLYWCH2Q96CP2 140 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 LIN7CQ9NUP9 197 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 SIGLEC9Q9Y336 463 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 PRELID3BQ9Y3B1 194 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 RNF114Q9Y508 228 aa13.6□□□□□ -0.23
RABGGTA-203ENST00000543002 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 NBR2O15453 112 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 NDUFA3O95167 84 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF735P0CB33 412 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 CNTFRP26992 372 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF45Q02386 682 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 CBX3Q13185 183 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 LPCAT3Q6P1A2 487 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 C12orf54Q6X4T0 127 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 GDPD1Q8N9F7 314 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 OR4C16Q8NGL9 310 aa13.59□□□□□ -0.23
RABGGTA-203ENST00000543002 DISC1C4P0D8 188 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 TNFSF12O43508 249 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 PROK1P58294 105 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 TMEM177Q53S58 311 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 FAAP20Q6NZ36 180 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 TERB2Q8NHR7 220 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
RABGGTA-203ENST00000543002 GPHA2Q96T91 129 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms