RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OR51B6Q9H340 312 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 RBKSQ9H477 322 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ZMAT4Q9H898 229 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 IL17BQ9UHF5 180 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 DMRT1Q9Y5R6 373 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF407Q9C0G0 2248 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 EPG5Q9HCE0 2579 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 A0A1B0GWJ7 208 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 LNP1A1A4G5 178 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MAP1LC3B2A6NCE7 125 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OOEPA6NGQ2 149 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ZFP92A6NM28 416 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 LRRC30A6NM36 301 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 C12orf77C9JDV5 145 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CDIPTO14735 213 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CYB5BO43169 146 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 RAMP3O60896 148 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 WDR1O75083 606 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 NXPH2O95156 264 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 HAND1O96004 215 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 IFNA1P01562 189 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TRGC2P03986 189 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OPN1MWP04001 364 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM87AP0C7U9 286 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OPN1MW2P0DN77 364 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OPN1MW3P0DN78 364 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SELEP16581 610 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 IGHV1-2P23083 117 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 FGF8P55075 233 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 NDUFA6P56556 154 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SOX8P57073 446 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CD81P60033 236 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ERVS71-1P61550 626 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PAX5Q02548 391 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PSG7Q13046 419 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SPANXN5Q5MJ07 72 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 INO80CQ6PI98 192 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SPNS3Q6ZMD2 512 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CYP2G1PQ6ZSU1 146 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 C1orf87Q8N0U7 546 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 OR1L1Q8NH94 360 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC25A40Q8TBP6 338 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 ABHD5Q8WTS1 349 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 GALMQ96C23 342 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM147Q9BVK8 224 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MAP1LC3BQ9GZQ8 125 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 DEFB127Q9H1M4 99 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CDH20Q9HBT6 801 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 AP5S1Q9NUS5 200 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 KCNIP1Q9NZI2 227 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 CLCF1Q9UBD9 225 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 TINAGQ9UJW2 476 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 KCNS2Q9ULS6 477 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
ATPAF1-212ENST00000542495 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 CTXND1A0A1B0GTU2 59 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 UBE2L5PA0A1B0GUS4 154 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 ODAMA1E959 279 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 CEBPZOSA8MTT3 80 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM250H0YL14 139 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 RAB29O14966 203 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 MLNRO43193 412 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF737O75373 536 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 CLDN14O95500 239 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 CLDN1O95832 211 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 IGHG3P01860 377 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 HBZP02008 142 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 MBP02144 154 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 PFN1P07737 140 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 SOD3P08294 240 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 TRGC1P0CF51 173 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 TUBG1P23258 451 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 MPV17P39210 176 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 OR3A1P47881 315 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 MEF2BQ02080 365 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 TGFBR3Q03167 851 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 FIP1L1Q6UN15 594 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 PRR18Q8N4B5 295 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 UBALD1Q8TB05 177 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 KLF14Q8TD94 323 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 FRZBQ92765 325 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 LHX4Q969G2 390 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 COQ2Q96H96 371 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 SSX3Q99909 188 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 TUBG2Q9NRH3 451 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 RBM7Q9Y580 266 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-212ENST00000542495 MAP1BP46821 2468 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF729A6NN14 1252 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 C17orf98A8MV24 154 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 IFNL4K9M1U5 179 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CDX4O14627 284 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms