RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 PRDX4Q13162 271 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 IGFBP7Q16270 282 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
AC005840.4-201ENST00000541242 WDR1O75083 606 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 CYC1P08574 325 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 CLDN15P56746 228 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 FGF12P61328 243 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 FBXW9Q5XUX1 488 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 C1orf210Q8IVY1 113 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.4
AC005840.4-201ENST00000541242 CACNA1DQ01668 2161 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 BDP1A6H8Y1 2624 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 LHX2P50458 406 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 SPINK9Q5DT21 86 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 STPG4Q8N801 248 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 OR2Y1Q8NGV0 311 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 LSM10Q969L4 123 aaKnown RBP12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
AC005840.4-201ENST00000541242 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 ZIC3O60481 467 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 CER1O95813 267 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 COL5A1-AS1Q5SY13 56 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 TMEM14EPQ6UXP3 125 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 MED12LQ86YW9 2145 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 NDUFB8O95169 186 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 DUSP3P51452 185 aaPredicted RBP12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 CPEB3Q8NE35 698 aaKnown RBP12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 CIB3Q96Q77 187 aaPredicted RBP12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 FBXL7Q9UJT9 491 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 TIMM9Q9Y5J7 89 aa12.51□□□□□ -0.41
AC005840.4-201ENST00000541242 LIFP15018 202 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 COL8A2P25067 703 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SSR4P51571 173 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 KRTDAPP60985 99 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 FOXL1Q12952 345 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 MSMO1Q15800 293 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SAPCD1Q5SSQ6 148 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 RPS19BP1Q86WX3 136 aaKnown RBP12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 OR5AU1Q8NGC0 362 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SH2D2AQ9NP31 389 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SLC17A3O00476 420 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SH2D1BO14796 132 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 VAMP5O95183 116 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 CRISP2P16562 243 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 FGFRL1Q8N441 504 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 Q8NFD4 153 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 SLC35E1Q96K37 410 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 FOXB1Q99853 325 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
AC005840.4-201ENST00000541242 CCL25O15444 150 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 COX5AP20674 150 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 BAGE3Q86Y29 109 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 PSMF1Q92530 271 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 MRPL18Q9H0U6 180 aaKnown RBP12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 TRAV24A0A0B4J272 114 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 A0A0G2JMM0 328 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 A0A1W2PPB8 328 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 A0A1W2PRS3 328 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A10PA6NDY2 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A18PA6NE21 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A16PA6NEW6 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A20PA6NIJ5 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A8PA6NJQ4 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A7PA6NKC0 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A22PA8MWA6 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 KIR3DP1A8MWS1 328 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A12PA8MX19 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A5PA8MXJ8 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A23PA8MXZ1 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 RAMP3O60896 148 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 KRASP01116 189 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A15PP0C7V4 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A13PP0C7W8 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A14PP0C7W9 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 FAM90A24PP0C7X0 464 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
AC005840.4-201ENST00000541242 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
AC005840.4-201ENST00000541242 F6UZH7 168 aa12.48□□□□□ -0.41
AC005840.4-201ENST00000541242 M0R296 226 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms