RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 COMMD5Q9GZQ3 224 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 TMEM222Q9H0R3 208 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 HMG20AQ9NP66 347 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF492Q9P255 531 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 DNAJC12Q9UKB3 198 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 ARAP1Q96P48 1450 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 SSH2Q76I76 1423 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 hCG_1818297A0A087WSY0 165 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 IGKV1-6A0A0C4DH72 117 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 ARL5CA6NH57 179 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 SIGLEC16A6NMB1 481 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 A8MT66 165 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 A8MWL6 223 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 H0YJW9 148 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 BPY2O14599 106 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 LY6G6DO95868 133 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 IGKV1-39P01597 117 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 OPN1SWP03999 348 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 IGKV1D-39P04432 117 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 CPMP14384 443 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 CA7P43166 264 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 NUDT2P50583 147 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 TNFAIP6P98066 277 aaPredicted RBP3.76□□□□□ -1.81
PRKDC-209ENST00000540819 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
PRKDC-209ENST00000540819 FAM78AQ5JUQ0 283 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 UMODL1-AS1Q8N2C9 162 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF615Q8N8J6 731 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 ST6GALNAC3Q8NDV1 305 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 OR4K5Q8NGD3 323 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 KLK6Q92876 244 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 STARD4Q96DR4 205 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 PFDN5Q99471 154 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 SERPINI1Q99574 410 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 CCL13Q99616 98 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 HDHD3Q9BSH5 251 aaPredicted RBP3.76□□□□□ -1.81
PRKDC-209ENST00000540819 CHST6Q9GZX3 395 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF331Q9NQX6 463 aaPredicted RBP3.76□□□□□ -1.81
PRKDC-209ENST00000540819 KCNIP2Q9NS61 270 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 MED29Q9NX70 200 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 TAAR3PQ9P1P4 343 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 CHD5Q8TDI0 1954 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 ROBO3Q96MS0 1386 aa3.76□□□□□ -1.81
PRKDC-209ENST00000540819 DENND4BO75064 1496 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-209ENST00000540819 A0A0J9YWU9 116 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 RFPL4AA6NLU0 287 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 SRRM5B3KS81 715 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 RFPL4AL1F8VTS6 287 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 PIRO00625 290 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF207O43670 478 aaKnown RBP3.75□□□□□ -1.81
PRKDC-209ENST00000540819 TRAF3IP2O43734 574 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-209ENST00000540819 GADD45GO95257 159 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF682O95780 498 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 APOA2P02652 100 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 HLA-DQB2P05538 268 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 OR56A5P0C7T3 313 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 GPX2P18283 190 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 NUDT1P36639 197 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 AKR1C3P42330 323 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 GNA12Q03113 381 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 MMDQ15546 238 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 SMIM21Q3B7S5 101 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF664Q8N3J9 261 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF675Q8TD23 568 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 RTN4IP1Q8WWV3 396 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-209ENST00000540819 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 MALSU1Q96EH3 234 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 LYSMD1Q96S90 227 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 HSPB9Q9BQS6 159 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 CHCHD7Q9BUK0 85 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 PBOV1Q9GZY1 135 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 RPS6KB2Q9UBS0 482 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 AK3Q9UIJ7 227 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 COQ4Q9Y3A0 265 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 LRP4O75096 1905 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 RFX7Q2KHR2 1363 aa3.75□□□□□ -1.81
PRKDC-209ENST00000540819 SCN10AQ9Y5Y9 1956 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 KLF18A0A0U1RQI7 1052 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 C5orf63A6NC05 138 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 CXorf1O96002 111 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 APCSP02743 223 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 GYPCP04921 128 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 HOXC5Q00444 222 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 CST6Q15828 149 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 ZFAND6Q6FIF0 208 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 PCP2Q8IVA1 136 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 BAP18Q8IXM2 172 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 MKXQ8IYA7 352 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 TMEM256Q8N2U0 113 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 SLC22A24Q8N4F4 322 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 OR8J3Q8NGG0 315 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 OR9Q1Q8NGQ5 310 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 LINC01006Q8NI28 216 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 GNPNAT1Q96EK6 184 aaPredicted RBP3.74□□□□□ -1.81
PRKDC-209ENST00000540819 GPR82Q96P67 336 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 TRIB3Q96RU7 358 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF382Q96SR6 550 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 NMNAT3Q96T66 252 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 CCDC32Q9BV29 185 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms