RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ORM1P02763 201 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 GGNQ86UU5 652 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM140Q9NV12 185 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.48
COLCA1-204ENST00000540738 HCP5Q6MZN7 132 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
COLCA1-204ENST00000540738 SCN2AQ99250 2005 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 DGAT2L7PQ6IED9 249 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 MESP1Q9BRJ9 268 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 KBTBD11-OT1A0A1B0GTJ5 212 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 ADAM10O14672 748 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 KBTBD11O94819 623 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 OR2C1O95371 312 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 TFPI2P48307 235 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
COLCA1-204ENST00000540738 URGCP-MRPS24S4R325 110 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 B4DSR2 109 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 MPDU1O75352 247 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF737O75373 536 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 MMP9P14780 707 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 CRYBA2P53672 197 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 CYB5R2Q6BCY4 276 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
COLCA1-204ENST00000540738 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 SIP14410 1827 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 IGKV1D-43A0A0B4J1Z2 117 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 KIAA1324LA8MWY0 1029 aaPredicted RBP12.07□□□□□ -0.48
COLCA1-204ENST00000540738 LRRC75BQ2VPJ9 315 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF318Q5VUA4 2279 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 COL4A6Q14031 1691 aa12.07□□□□□ -0.48
COLCA1-204ENST00000540738 SEC14L6B5MCN3 397 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 G3V3Q6 166 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 TRGV3P03979 118 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 GOLT1BQ9Y3E0 138 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 DDB2Q92466 427 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 RD3LP0DJH9 198 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 SSTR5P35346 364 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 RELL2Q8NC24 303 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-204ENST00000540738 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-204ENST00000540738 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 PGLYRP1O75594 196 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
COLCA1-204ENST00000540738 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 OR2T8A6NH00 312 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM14DPA8MWL7 114 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 ALX3O95076 343 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 RAB5AP20339 215 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 CD1BP29016 333 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF672Q499Z4 452 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-204ENST00000540738 FAM201AQ5SY85 155 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 MIXL1Q9H2W2 232 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 TUBA4BQ9H853 241 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 NYNRINQ9P2P1 1898 aaKnown RBP12.05□□□□□ -0.48
COLCA1-204ENST00000540738 FABP9Q0Z7S8 132 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-204ENST00000540738 RCC2Q9P258 522 aaKnown RBP12.05□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM78Q5T7P6 136 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 DTX1Q86Y01 620 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 IGSF23A1L1A6 192 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 H0Y8G0 127 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 S1PR2O95136 353 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 MOSP00540 346 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 U3KQA8 63 aa12.05□□□□□ -0.48
COLCA1-204ENST00000540738 RNASEK-C17orf49H0YIS7 233 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 SNCGO76070 127 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 HPXP02790 462 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 MARCH11A6NNE9 402 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 ACAA1P09110 424 aaPredicted RBP12.04□□□□□ -0.48
COLCA1-204ENST00000540738 MST1P26927 711 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 EWSR1Q01844 656 aaKnown RBP eCLIP12.04□□□□□ -0.48
COLCA1-204ENST00000540738 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 IL22RA2Q969J5 263 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 PHYHIPLQ96FC7 376 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 ANK1P16157 1881 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 HMSDA8MTL9 139 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 PGA5P0DJD9 388 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 VSIG10L2P0DP72 767 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 NPPCP23582 126 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
COLCA1-204ENST00000540738 GUK1Q16774 197 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 FOXB2Q5VYV0 432 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 FGFRL1Q8N441 504 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms