RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RBM7Q9Y580 266 aaKnown RBP13.35□□□□□ -0.27
UBC-208ENST00000540700 LINC00473A8K010 186 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 GNRHRP30968 328 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 TSPAN5P62079 268 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 CCDC144NLQ6NUI1 221 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 ARRDC1Q8N5I2 433 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.34□□□□□ -0.27
UBC-208ENST00000540700 CAPSLQ8WWF8 208 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 S100ZQ8WXG8 99 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 RITA1Q96K30 269 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 S1PR3Q99500 378 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 SLC5A7Q9GZV3 580 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
UBC-208ENST00000540700 H0YJW9 148 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 CLDN34H7C241 214 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 CD40LGP29965 261 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 DUTP33316 252 aaKnown RBP13.33□□□□□ -0.28
UBC-208ENST00000540700 PPP5CP53041 499 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 HERV-K104P61576 105 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 IFITM3Q01628 133 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 TOMM5Q8N4H5 51 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 TMEM86BQ8N661 226 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 Q8N6K4 173 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 OR51S1Q8NGJ8 323 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 DDB2Q92466 427 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 GHITMQ9H3K2 345 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
UBC-208ENST00000540700 LINC00854A0A1B0GVQ3 168 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 PLA2G10O15496 165 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 TXNL1O43396 289 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 TNFSF12O43508 249 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 IFNA6P05013 189 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 MDKP21741 143 aaPredicted RBP13.32□□□□□ -0.28
UBC-208ENST00000540700 CD1BP29016 333 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 SRSF4Q08170 494 aaKnown RBP13.32□□□□□ -0.28
UBC-208ENST00000540700 EBI3Q14213 229 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 ZNF846Q147U1 533 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 MEF2DQ14814 521 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 SCGB2B2Q4G0G5 96 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 TRIQKQ629K1 86 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 ZNF57Q68EA5 555 aaPredicted RBP13.32□□□□□ -0.28
UBC-208ENST00000540700 HIST2H2BDQ6DRA6 164 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 OR5AN1Q8NGI8 311 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 ABCB10Q9NRK6 738 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 POMT1Q9Y6A1 747 aa13.32□□□□□ -0.28
UBC-208ENST00000540700 GPR137BO60478 399 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
UBC-208ENST00000540700 PI3P19957 117 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 BTCP35070 178 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 HNF4GQ14541 408 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 THNSL2Q86YJ6 484 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 BVESQ8NE79 360 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 OR5R1Q8NH85 324 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
UBC-208ENST00000540700 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 CCDC32Q9BV29 185 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 WDR12Q9GZL7 423 aaKnown RBP13.31□□□□□ -0.28
UBC-208ENST00000540700 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
UBC-208ENST00000540700 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 IGKV1-16P04430 117 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 CNTFRP26992 372 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 BRS3P32247 399 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 UCP3P55916 312 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 MSMO1Q15800 293 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 PHLDA2Q53GA4 152 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 TERB2Q8NHR7 220 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 MARCH1Q8TCQ1 289 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 MCUBQ9NWR8 336 aa13.3□□□□□ -0.28
UBC-208ENST00000540700 FAM181BA6NEQ2 426 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 AMY1AP04745 511 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 THBS3P49746 956 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 F2RL1P55085 397 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 RELBQ01201 579 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 HES1Q14469 280 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 OR2B11Q5JQS5 317 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 IDO2Q6ZQW0 420 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
UBC-208ENST00000540700 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 TBC1D24Q9ULP9 559 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 VSIG4Q9Y279 399 aa13.29□□□□□ -0.28
UBC-208ENST00000540700 SH2D7A6NKC9 451 aaPredicted RBP13.28□□□□□ -0.28
UBC-208ENST00000540700 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
UBC-208ENST00000540700 UPK1BO75841 260 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 SLC22A5O76082 557 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 TMEM11P17152 192 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 CCR6P51684 374 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 AP3S2P59780 193 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 Q6ZS46 218 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 KCTD9Q7L273 389 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 RTBDNQ9BSG5 229 aaPredicted RBP13.28□□□□□ -0.28
UBC-208ENST00000540700 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
UBC-208ENST00000540700 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms