RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 SPACA6W5XKT8 324 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 TRAV9-2A0A087WT02 112 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 MUC21A0A0G2JKD1 596 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 MUC21A0A140T8X8 626 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 A0A1W2PS18 150 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 CDIPTO14735 213 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 SCRG1O75711 98 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 IGLL1P15814 213 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF823P16415 610 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 AZU1P20160 251 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 NPPCP23582 126 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 OPRM1P35372 400 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 CRYBA4P53673 196 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 RPL27P61353 136 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 ID3Q02535 119 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 MUC21Q5SSG8 566 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 BHLHA15Q7RTS1 189 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 UEVLDQ8IX04 471 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 OR51E1Q8TCB6 317 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 TMEM38BQ9NVV0 291 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 SHANK1Q9Y566 2161 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 SPAARA0A1B0GVQ0 90 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 A0A1B0GX78 115 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 ALG1L2C9J202 215 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 J3QR06 171 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 S1PR2O95136 353 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 NUDT3O95989 172 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 MT-CO2P00403 227 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 CEACAM3P40198 252 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 GPR6P46095 362 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 RAB9AP51151 201 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF83P51522 516 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 SERF2P84101 59 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 RHBDD2Q6NTF9 364 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 DGAT2L6Q6ZPD8 337 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 COMMD2Q86X83 199 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 HOXB13Q92826 284 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF524Q96C55 264 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 NEIL1Q96FI4 390 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 LIN37Q96GY3 246 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 KCNS1Q96KK3 526 aa8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 AKIRIN1Q9H9L7 192 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 COL5A1P20908 1838 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-243ENST00000540387 C3orf85A0A1B0GTC6 90 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 C17orf112F2Z3M2 114 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 FCN1O00602 326 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 MT-CO3P00414 261 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 CA2P00918 260 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 S100GP29377 79 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 FOXL2P58012 376 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 NNATQ16517 81 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 ASCL4Q6XD76 172 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF695Q8IW36 515 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 RPP25LQ8N5L8 163 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 CCDC71LQ8N9Z2 235 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 OR5P3Q8WZ94 311 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 RCHY1Q96PM5 261 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 SAA2-SAA4A0A096LPE2 208 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 LOC102725191A0A1B0GVB3 256 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 KIAA1324LA8MWY0 1029 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 M0R1X1 148 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF324O75467 553 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 GPR75O95800 540 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 IGKV1D-33P01593 117 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 IGKV1-33P01594 117 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 CELA3BP08861 270 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 SMAGPQ0VAQ4 97 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 IL11RAQ14626 422 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 HES3Q5TGS1 186 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF721Q8TF20 911 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 CLEC7AQ9BXN2 247 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 TMEM222Q9H0R3 208 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 PLEKHJ1Q9NW61 149 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 LOXL2Q9Y4K0 774 aa8.04□□□□□ -1.12
CTNNA1-243ENST00000540387 TGFBR3LH3BV60 316 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 MPPED1O15442 326 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 REG1AP05451 166 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 EGR1P18146 543 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 GDF1P27539 372 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 KLHL24Q6TFL4 600 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 FAM58AQ8N1B3 248 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF114Q8NC26 417 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 OR10P1Q8NGE3 313 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 OR1K1Q8NGR3 316 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 RNF133Q8WVZ7 376 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 PRTFDC1Q9NRG1 225 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 PEF1Q9UBV8 284 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 UBE2J1Q9Y385 318 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 PGPEP1LA6NFU8 196 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
CTNNA1-243ENST00000540387 SIRPB1O00241 398 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms