RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 FAM215AQ9Y5M1 114 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 MAP1LC3B2A6NCE7 125 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 M0R1B8 84 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 PPIHO43447 177 aaKnown RBP9.6□□□□□ -0.87
C11orf54-214ENST00000540113 IFNA4P05014 189 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 OR8U8P0C7N1 319 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 BCL2P10415 239 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 PRDX2P32119 198 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 KHDC3LQ587J8 217 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 NCR3LG1Q68D85 454 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 VKORC1L1Q8N0U8 176 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 RPP25LQ8N5L8 163 aaKnown RBP9.6□□□□□ -0.87
C11orf54-214ENST00000540113 ZNRF1Q8ND25 227 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 MAP1LC3BQ9GZQ8 125 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 SLC25A22Q9H936 323 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 SLC25A15Q9Y619 301 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 RP1L1Q8IWN7 2480 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-214ENST00000540113 UBE2CO00762 179 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 PROP1O75360 226 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 P0C879 139 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 SELLP14151 372 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 P2RY6Q15077 328 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 ELOBQ15370 118 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 TMEM41BQ5BJD5 291 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
C11orf54-214ENST00000540113 IGKV1D-17A0A075B6S4 117 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 A0A1B0GWJ7 208 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 CATR1Q13166 79 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 ZNF674Q2M3X9 581 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 SMIM21Q3B7S5 101 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 RPL39P5Q59GN2 51 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 MBNL2Q5VZF2 373 aaKnown RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 ZNF474Q6S9Z5 364 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 Q6ZS92 163 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 H2BFWTQ7Z2G1 175 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 DTD1Q8TEA8 209 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 SSX3Q99909 188 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 QTRT1Q9BXR0 403 aaKnown RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 UNKLQ9H9P5 680 aaKnown RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 C15orf65H3BRN8 121 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 SPRY3O43610 288 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 YIF1AO95070 293 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 OR9G9P0C7N8 305 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 FGF7P21781 194 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 BMP5P22003 454 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 DUX4L9Q6RFH8 374 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 CA5BP1Q8WTZ4 195 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 MBD3L1Q8WWY6 194 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 LHX4Q969G2 390 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 S100PBPQ96BU1 408 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 AGMATQ9BSE5 352 aa9.58□□□□□ -0.88
C11orf54-214ENST00000540113 PSMG3Q9BT73 122 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-214ENST00000540113 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 CYB5BO43169 146 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 FCGR3BO75015 233 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 ZNF737O75373 536 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 IGHV2-5P01817 119 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 MDKP21741 143 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 EDDM3BP56851 147 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 NHLH1Q02575 133 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 MSMO1Q15800 293 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 MOGAT3Q86VF5 341 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 RBMXL3Q8N7X1 1067 aaKnown RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 SLC39A9Q9NUM3 307 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 GNG12Q9UBI6 72 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 ZFHX2Q9C0A1 2572 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 HCFC1P51610 2035 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 PIGBOS1A0A0B4J2F0 54 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 MARCH11A6NNE9 402 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 TUBG1P23258 451 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 COL8A2P25067 703 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 ZNF134P52741 427 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 KIAA0141Q14154 515 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 C1orf229Q6ZS94 237 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 C22orf34Q6ZV56 151 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 OR2V2Q96R30 315 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 TUBG2Q9NRH3 451 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 WASF3Q9UPY6 502 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 ATMQ13315 3056 aa9.57□□□□□ -0.88
C11orf54-214ENST00000540113 RIF1Q5UIP0 2472 aaKnown RBP9.57□□□□□ -0.88
C11orf54-214ENST00000540113 SPINT2O43291 252 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 CLN5O75503 358 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 CLDN14O95500 239 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 GPR12P47775 334 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 NDUFA6P56556 154 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 SERF2P84101 59 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 GCSAMQ8N6F7 178 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 ZBTB34Q8NCN2 500 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 LURAP1Q96LR2 239 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 CEP250Q9BV73 2442 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms