RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 MED20Q9H944 212 aa6.38□□□□□ -1.39
NECAP1-204ENST00000540083 MED12Q93074 2177 aa6.38□□□□□ -1.39
NECAP1-204ENST00000540083 DIDO1Q9BTC0 2240 aaKnown RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 MED12LQ86YW9 2145 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 MPDZO75970 2070 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 NCOA6Q14686 2063 aaPredicted RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 TRAV27A0A087WT01 109 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF814B7Z6K7 855 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 TMEM250H0YL14 139 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 TRAF3IP2O43734 574 aaPredicted RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 SMPD2O60906 423 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 COX6B1P14854 86 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 CCNOP22674 350 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 UCP1P25874 307 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 PPP1CCP36873 323 aaKnown RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 GABRA2P47869 451 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 NANOS3P60323 173 aaKnown RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 S100A10P60903 97 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 ACKR1Q16570 336 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 TIMM23BQ5SRD1 257 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 TRAPPC6BQ86SZ2 158 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 C1orf174Q8IYL3 243 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 ZIC4Q8N9L1 334 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 CMTM2Q8TAZ6 248 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 FAM213BQ8TBF2 198 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 ASB10Q8WXI3 467 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 SLAMF6Q96DU3 332 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 OR10C1Q96KK4 312 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 C4orf45Q96LM5 186 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 NKX3-1Q99801 234 aaPredicted RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 ELOVL1Q9BW60 279 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 PRR13Q9NZ81 148 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 AK3Q9UIJ7 227 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 LRP12Q9Y561 859 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 URGCP-MRPS24S4R325 110 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 CFAP46Q8IYW2 2715 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 SPENQ96T58 3664 aaKnown RBP6.37□□□□□ -1.39
NECAP1-204ENST00000540083 KIAA1549Q9HCM3 1950 aa6.37□□□□□ -1.39
NECAP1-204ENST00000540083 HIVEP3Q5T1R4 2406 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 TRAV8-7A0A075B6U6 113 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 IGHV2-26A0A0B4J1V2 119 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 VSTM5A8MXK1 200 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 TRAPPC2LH3BP13 241 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 H7BYZ3 331 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 CORTO00230 105 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 SIRPB1O00241 398 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 MMP7P09237 267 aaPredicted RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 BCL2P10415 239 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 FAHP16930 419 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 COX5AP20674 150 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 PTNP21246 168 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 HRH1P35367 487 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 CDC34P49427 236 aaPredicted RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 SELENOVP59797 346 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 LCN6P62502 163 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 IAH1Q2TAA2 248 aaPredicted RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 TSPO2Q5TGU0 170 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF474Q6S9Z5 364 aaPredicted RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 C1orf122Q6ZSJ8 110 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF627Q7L945 461 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 CDC20BQ86Y33 519 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 TMEM123Q8N131 208 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF676Q8N7Q3 588 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ADAD2Q8NCV1 583 aaKnown RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF519Q8TB69 540 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 TMEM54Q969K7 222 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZMYND19Q96E35 227 aaPredicted RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 SLC7A10Q9NS82 523 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 MED29Q9NX70 200 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF586Q9NXT0 402 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF319Q9P2F9 582 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 LAMP3Q9UQV4 416 aa6.36□□□□□ -1.39
NECAP1-204ENST00000540083 C14orf166Q9Y224 244 aaKnown RBP6.36□□□□□ -1.39
NECAP1-204ENST00000540083 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 SAA2-SAA4A0A096LPE2 208 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 TRBV9A0A0B4J1U6 114 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 SERTM2A0A1B0GWG4 89 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 PRSS37A4D1T9 235 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 NKX2-6A6NCS4 301 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 DHHO43323 396 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 PSPNO60542 156 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 CTSDP07339 412 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 IGLC2P0DOY2 106 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 IGLC3P0DOY3 106 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 HLA-DOBP13765 273 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 KLK2P20151 261 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 IGHV1-2P23083 117 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 PSMB10P40306 273 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 CDKN2AP42771 156 aaKnown RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 GALR1P47211 349 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 ZNF133P52736 654 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 PCBD1P61457 104 aa6.35□□□□□ -1.39
NECAP1-204ENST00000540083 RPL23AP62750 156 aaKnown RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 SUMO1P63165 101 aaKnown RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
NECAP1-204ENST00000540083 SRPXP78539 464 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms