RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TMEM109Q9BVC6 243 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 MAP1LC3AQ9H492 121 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 C11orf1Q9H5F2 150 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 NKIRAS1Q9NYS0 192 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 ALG5Q9Y673 324 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 TENM3Q9P273 2699 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 LCTP09848 1927 aa1.07□□□□□ -2.24
CCDC7-209ENST00000539197 COL18A1P39060 1754 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 TMED7-TICAM2A0A0A6YYA0 188 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 TRAV8-1A0A0A6YYK1 113 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 IGHV3-73A0A0B4J1V6 119 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 TEX50A0A1B0GTY4 177 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 MDFIC2A0A1B0GVS7 189 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 EVPLLA8MZ36 301 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 M0QZ92 97 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 M0R381 172 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 CXCR6O00574 342 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 GSTZ1O43708 216 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 SSNA1O43805 119 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 HLA-DRAP01903 254 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 CD7P09564 240 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 OCM2P0CE71 109 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 SLC25A16P16260 332 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 RPS12P25398 132 aaKnown RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 OR10J1P30954 320 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 CA7P43166 264 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 MAGEA2P43356 314 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 GABRA4P48169 554 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 CXCR4P61073 352 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 HLA-DRB3P79483 266 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 FABP5Q01469 135 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 ZNF117Q03924 483 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 SLC36A2Q495M3 483 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 HSP90B2PQ58FF3 399 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 SAPCD1Q5SSQ6 148 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 N4BP2L1Q5TBK1 243 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 BAP18Q8IXM2 172 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 HAVCR2Q8TDQ0 301 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 DCANP1Q8TF63 244 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 ZNF625Q96I27 306 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 ARL5BQ96KC2 179 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 MGLLQ99685 303 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 SMDT1Q9H4I9 107 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 PCYT1BQ9Y5K3 369 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 V9GYY5 206 aaPredicted RBP1.06□□□□□ -2.24
CCDC7-209ENST00000539197 PTPRJQ12913 1337 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 A0A1W2PP64 1363 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 PLCH2O75038 1416 aa1.06□□□□□ -2.24
CCDC7-209ENST00000539197 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 A0A0J9YX75 114 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 NIPSNAP2O75323 286 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 C8orf88P0DMB2 117 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 CCL3P10147 92 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 ZNF7P17097 686 aaPredicted RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 NPPCP23582 126 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 RPL12P30050 165 aaKnown RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 CD200P41217 278 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 REG1BP48304 166 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 CTBP2P56545 445 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 RWDD2BP57060 319 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 TMEM33P57088 247 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 SNAP25P60880 206 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 RPS24P62847 133 aaKnown RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 CCDC121Q6ZUS5 278 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 COMMD7Q86VX2 200 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 LRRC34Q8IZ02 419 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 Q8N402 240 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 TMEM161BQ8NDZ6 487 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 C16orf78Q8WTQ4 265 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 RNASE6Q93091 150 aaKnown RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 PARD6GQ9BYG4 376 aaPredicted RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 SLC2A9Q9NRM0 540 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 FGFR1OP2Q9NVK5 253 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 USE1Q9NZ43 259 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 EMC3Q9P0I2 261 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 DKKL1Q9UK85 242 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 HHLA2Q9UM44 414 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 SNX12Q9UMY4 172 aa1.05□□□□□ -2.24
CCDC7-209ENST00000539197 POLR3HQ9Y535 204 aaPredicted RBP1.05□□□□□ -2.24
CCDC7-209ENST00000539197 SDK1Q7Z5N4 2213 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 SHANK3Q9BYB0 1731 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 IGKV1D-43A0A0B4J1Z2 117 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 DHRS12A0PJE2 317 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 C5orf49A4QMS7 147 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 C21orf140B9A014 251 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 LRRN3E7EW58 273 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 SLC16A4O15374 487 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 ZNF189O75820 626 aaPredicted RBP1.04□□□□□ -2.24
CCDC7-209ENST00000539197 HLA-DQB2P05538 268 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 IL3P08700 152 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 CRHBPP24387 322 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 ATP6V0CP27449 155 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 TAS2R45P59539 299 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 HES1Q14469 280 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 RSU1Q15404 277 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 LGALS9CQ6DKI2 356 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 TNFAIP8L2Q6P589 184 aaPredicted RBP1.04□□□□□ -2.24
CCDC7-209ENST00000539197 AMTNQ6UX39 209 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 LRRN1Q6UXK5 716 aa1.04□□□□□ -2.24
CCDC7-209ENST00000539197 RASSF6Q6ZTQ3 369 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms