RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 EDARADDQ8WWZ3 215 aa10.61□□□□□ -0.71
PBX3-212ENST00000538998 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
PBX3-212ENST00000538998 GGTLC1Q9BX51 225 aa10.61□□□□□ -0.71
PBX3-212ENST00000538998 MRPS18AQ9NVS2 196 aaKnown RBP10.61□□□□□ -0.71
PBX3-212ENST00000538998 RPL36Q9Y3U8 105 aaKnown RBP10.61□□□□□ -0.71
PBX3-212ENST00000538998 BMPR1BO00238 502 aa10.6□□□□□ -0.71
PBX3-212ENST00000538998 TNFRSF9Q07011 255 aa10.6□□□□□ -0.71
PBX3-212ENST00000538998 MOB1BQ7L9L4 216 aa10.6□□□□□ -0.71
PBX3-212ENST00000538998 RHOXF1Q8NHV9 184 aa10.6□□□□□ -0.71
PBX3-212ENST00000538998 GATAD1Q8WUU5 269 aa10.6□□□□□ -0.71
PBX3-212ENST00000538998 PARP12Q9H0J9 701 aaKnown RBP10.6□□□□□ -0.71
PBX3-212ENST00000538998 TECRQ9NZ01 308 aaKnown RBP10.6□□□□□ -0.71
PBX3-212ENST00000538998 HECTD4Q9Y4D8 3996 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 OGG1O15527 345 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 DEDDO75618 318 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 PJVKQ0ZLH3 352 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 YIF1BQ5BJH7 314 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 FAM46BQ96A09 425 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 C11orf54Q9H0W9 315 aaPredicted RBP10.59□□□□□ -0.71
PBX3-212ENST00000538998 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
PBX3-212ENST00000538998 GHRLQ9UBU3 117 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
PBX3-212ENST00000538998 LOC102724200A0A096LPH7 203 aaPredicted RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 PROP1O75360 226 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 TUSC2O75896 110 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 NAPSAO96009 420 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 GNAO1P09471 354 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 FOLR2P14207 255 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 ATF4P18848 351 aaPredicted RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 ZBTB25P24278 435 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 OR2G6Q5TZ20 316 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 ZNF880Q6PDB4 577 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 NKAIN3Q8N8D7 197 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 THRSPQ92748 146 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 WDR89Q96FK6 387 aaPredicted RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 PHB2Q99623 299 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 UQCC2Q9BRT2 126 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 FAAP24Q9BTP7 215 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 FGF20Q9NP95 211 aaPredicted RBP10.58□□□□□ -0.72
PBX3-212ENST00000538998 BABAM2Q9NXR7 383 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 ZNF221Q9UK13 617 aa10.58□□□□□ -0.72
PBX3-212ENST00000538998 TRBV5-7A0A0A0MS05 114 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 RBMXL2O75526 392 aaKnown RBP10.57□□□□□ -0.72
PBX3-212ENST00000538998 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 CRYGBP07316 175 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 OR9G9P0C7N8 305 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 DCKP27707 260 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 CEACAM6P40199 344 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 ETV1P50549 477 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 RPS11P62280 158 aaKnown RBP eCLIP10.57□□□□□ -0.72
PBX3-212ENST00000538998 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
PBX3-212ENST00000538998 FAM209BQ5JX69 171 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 C6orf201Q7Z4U5 140 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 LYG2Q86SG7 212 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 SETD6Q8TBK2 473 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 PTX4Q96A99 478 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 OR1A1Q9P1Q5 309 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 ZNF230Q9UIE0 474 aaPredicted RBP10.57□□□□□ -0.72
PBX3-212ENST00000538998 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
PBX3-212ENST00000538998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
PBX3-212ENST00000538998 UBBP0CG47 229 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 APELAP0DMC3 54 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 BMI1P35226 326 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 LINC00205P59089 165 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 RHOGP84095 191 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 ATP5G2Q06055 141 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 CBX3Q13185 183 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 OR52B4Q8NGK2 314 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 APH1BQ8WW43 257 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 HARBI1Q96MB7 349 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 RIMS4Q9H426 269 aaPredicted RBP10.56□□□□□ -0.72
PBX3-212ENST00000538998 AKIP1Q9NQ31 210 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 SCN3BQ9NY72 215 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 MGAT4AQ9UM21 535 aa10.56□□□□□ -0.72
PBX3-212ENST00000538998 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 TRBV9A0A0B4J1U6 114 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 A0A1W2PPK0 400 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 MSGN1A6NI15 193 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 LGALS9O00182 355 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 MPPED1O15442 326 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
PBX3-212ENST00000538998 LALBAP00709 142 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 MED21Q13503 144 aa10.55□□□□□ -0.72
PBX3-212ENST00000538998 SMN1Q16637 294 aaKnown RBP10.55□□□□□ -0.72
PBX3-212ENST00000538998 ANKRD55Q3KP44 614 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms