RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RPUSD1Q9UJJ7 312 aaKnown RBP3.54□□□□□ -1.84
SNHG1-208ENST00000538266 RAB22AQ9UL26 194 aa3.54□□□□□ -1.84
SNHG1-208ENST00000538266 KCNS2Q9ULS6 477 aa3.54□□□□□ -1.84
SNHG1-208ENST00000538266 CCDC168Q8NDH2 2452 aa3.54□□□□□ -1.84
SNHG1-208ENST00000538266 APCP25054 2843 aa3.54□□□□□ -1.84
SNHG1-208ENST00000538266 CENPEQ02224 2701 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CR1P17927 2039 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 DCHS2Q6V1P9 2916 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CELSR2Q9HCU4 2923 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TRGV10A0A0A0MS01 117 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 A0A0A6YYH2 397 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TRAV24A0A0B4J272 114 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 PPIAL4CA0A0B4J2A2 164 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM30CPA0ZSE6 113 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 ODAMA1E959 279 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 A6NJ64 397 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM14DPA8MWL7 114 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 J3QLI3 93 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 DNASE2O00115 360 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 SULT1C2O00338 296 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TNFRSF13BO14836 293 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 LDLRAD4O15165 306 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CD5LO43866 347 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CA11O75493 328 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR2F2O95006 317 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 SIX6O95475 246 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 APOC3P02656 99 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 RLN2P04090 185 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MELTFP08582 738 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR4E1P0C645 316 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 PPIAL4GP0DN37 164 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CD37P11049 281 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 SLC25A4P12235 298 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 LMO1P25800 156 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CD34P28906 385 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 PRSS3P35030 304 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 GLP1RP43220 463 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR3A1P47881 315 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 PCP4P48539 62 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 H2BFSP57053 126 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TAS2R19P59542 299 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 QRFPP83859 136 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 DEFA5Q01523 94 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MEF2CQ06413 473 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 AESQ08117 197 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR2F1Q13607 317 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MEF2DQ14814 521 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 ARL6IP1Q15041 203 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 KRBOX4Q5JUW0 171 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MORN5Q5VZ52 161 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 Q6P435 159 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 DUX4L9Q6RFH8 374 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF841Q6ZN19 808 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 C17orf107Q6ZR85 190 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 C6orf201Q7Z4U5 140 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 BPIFB2Q8N4F0 458 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 KCNRGQ8N5I3 272 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 C12orf45Q8N5I9 185 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF565Q8N9K5 539 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM229BQ8NBD8 167 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR4S1Q8NGB4 309 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR51S1Q8NGJ8 323 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR5M8Q8NGP6 311 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR10R2Q8NGX6 335 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 RPL36ALQ969Q0 106 aaKnown RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 PTX4Q96A99 478 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 NARS2Q96I59 477 aaKnown RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 SLC25A21Q9BQT8 299 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 NUDT16L1Q9BRJ7 211 aaKnown RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 NICN1Q9BSH3 213 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 DCTN5Q9BTE1 182 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TM2D1Q9BX74 207 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 NKX6-2Q9C056 277 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 LPAR5Q9H1C0 372 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 GAL3ST2Q9H3Q3 398 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 METTL8Q9H825 291 aaKnown RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 CHMP1AQ9HD42 196 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-208ENST00000538266 RAB9BQ9NP90 201 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 YAE1D1Q9NRH1 226 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 C19orf12Q9NSK7 152 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 OR6C3Q9NZP0 311 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 COMMD9Q9P000 198 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MBD2Q9UBB5 411 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 TRAPPC2LQ9UL33 140 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 LINC00312Q9Y6C7 94 aa3.53□□□□□ -1.84
SNHG1-208ENST00000538266 MYO9AB2RTY4 2548 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 CREBBPQ92793 2442 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 TRAV18A0A075B6X5 111 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 TRAV14DV4A0A0A6YYC5 116 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 MEX3AA1L020 520 aaKnown RBP3.52□□□□□ -1.85
SNHG1-208ENST00000538266 RAB19A4D1S5 217 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 FAM74A7A6NL05 159 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 SERPINE3A8MV23 424 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 DISC1C4P0D8 188 aa3.52□□□□□ -1.85
SNHG1-208ENST00000538266 H7C2Y5 167 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms