RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 IGLV2-23P01705 113 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 CRYGBP07316 175 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 CD3GP09693 182 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 HSMCR30P0CW71 290 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 CD40LGP29965 261 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 PJVKQ0ZLH3 352 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 TPBGQ13641 420 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 RAB11BQ15907 218 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 C2orf76Q3KRA6 126 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 PDPNQ86YL7 162 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 POC5Q8NA72 575 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 GRPEL2Q8TAA5 225 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 FAM3DQ96BQ1 224 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 SLA2Q9H6Q3 261 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 C12orf4Q9NQ89 552 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 ZNF355PQ9NSJ1 428 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 SLC35D1Q9NTN3 355 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 SCN3BQ9NY72 215 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 KCNK7Q9Y2U2 307 aa6.48□□□□□ -1.37
USP28-203ENST00000537490 HUWE1Q7Z6Z7 4374 aaKnown RBP6.48□□□□□ -1.37
USP28-203ENST00000537490 TMEM272A0A1B0GTI8 110 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 SRRM4A7MD48 611 aaKnown RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 ANKRD65E5RJM6 399 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 CNIH1O95406 144 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 IGLV1-51P01701 117 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 APOA2P02652 100 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 GSTT2P0CG29 244 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 GSTT2BP0CG30 244 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 IGHV4-30-4P0DP06 118 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 FABP5Q01469 135 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 KLF5Q13887 457 aaPredicted RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 MRGPRG-AS1Q2M3A8 158 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 MOGAT2Q3SYC2 334 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 IGSF11Q5DX21 431 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 OR4A4PQ8NGN8 299 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 C5orf30Q96GV9 206 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 TM2D3Q9BRN9 247 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 RSRP1Q9BUV0 290 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 ELOVL1Q9BW60 279 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 DUSP21Q9H596 190 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 ZMAT4Q9H898 229 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 RANGRFQ9HD47 186 aaPredicted RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 SDHAF2Q9NX18 166 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 GAR1Q9NY12 217 aaKnown RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 NKX1-2Q9UD57 310 aaPredicted RBP6.47□□□□□ -1.37
USP28-203ENST00000537490 STUB1Q9UNE7 303 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 TPRKBQ9Y3C4 175 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 V9GY05 133 aa6.47□□□□□ -1.37
USP28-203ENST00000537490 C13orf42A0A1B0GVH6 325 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 H3BUA1 57 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 BET1O15155 118 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 FABP7O15540 132 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 DENRO43583 198 aaKnown RBP6.46□□□□□ -1.38
USP28-203ENST00000537490 RBMXL2O75526 392 aaKnown RBP6.46□□□□□ -1.38
USP28-203ENST00000537490 ARL6IP5O75915 188 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 LYL1P12980 280 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 CALRP27797 417 aaKnown RBP6.46□□□□□ -1.38
USP28-203ENST00000537490 MAP2K4P45985 399 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 LGALS7P47929 136 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 AQP4P55087 323 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 DEFA5Q01523 94 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 MLLT11Q13015 90 aaPredicted RBP6.46□□□□□ -1.38
USP28-203ENST00000537490 TRAM1Q15629 374 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 HES5Q5TA89 166 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 IL34Q6ZMJ4 242 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 ANKRD13BQ86YJ7 626 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 BVESQ8NE79 360 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 OR56B1Q8NGI3 324 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 NRG4Q8WWG1 115 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 MAFIPQ8WZ33 124 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 CITED4Q96RK1 184 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 CABLES2Q9BTV7 478 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 OR2D2Q9H210 308 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 VCXQ9H320 206 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.38
USP28-203ENST00000537490 TENM2Q9NT68 2774 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 TRBV6-7A0A0A0MS04 114 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 A0A0G2JLM5 398 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 SHISA3A0PJX4 238 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 A8MZ25 164 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 RGS10O43665 173 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 FCGR3AP08637 254 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 APELAP0DMC3 54 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 GNB3P16520 340 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 ZP3P21754 424 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 PSMA1P25786 263 aaKnown RBP6.45□□□□□ -1.38
USP28-203ENST00000537490 SERPINB10P48595 397 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 SYNJ2BPP57105 145 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 DYRK1AQ13627 763 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 TMEM177Q53S58 311 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 ZFAND6Q6FIF0 208 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 ZNF343Q6P1L6 599 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 OR9G4Q8NGQ1 327 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 RAB3CQ96E17 227 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 HARBI1Q96MB7 349 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 TMEM68Q96MH6 324 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms