RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RPS11P62280 158 aaKnown RBP eCLIP6.07□□□□□ -1.44
CHFR-211ENST00000535897 CBX3Q13185 183 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 EXOSC2Q13868 293 aaKnown RBP6.07□□□□□ -1.44
CHFR-211ENST00000535897 OR10K2Q6IF99 312 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 SLC16A13Q7RTY0 426 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 ZNF383Q8NA42 475 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 THRSPQ92748 146 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 HARBI1Q96MB7 349 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 TMEM68Q96MH6 324 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 UQCC2Q9BRT2 126 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 AGMATQ9BSE5 352 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 NICN1Q9BSH3 213 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 TMEM59Q9BXS4 323 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 SLC35D1Q9NTN3 355 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 PLEKHJ1Q9NW61 149 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 GHRLQ9UBU3 117 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 CLEC2DQ9UHP7 191 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 EXOSC1Q9Y3B2 195 aaKnown RBP6.07□□□□□ -1.44
CHFR-211ENST00000535897 SELENOKQ9Y6D0 94 aa6.07□□□□□ -1.44
CHFR-211ENST00000535897 MSGN1A6NI15 193 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 BMPR1BO00238 502 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 ITGB1BP1O14713 200 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 SHOXO15266 292 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 NAPSAO96009 420 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 PRH1P02810 166 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 UBBP0CG47 229 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 HTR2CP28335 458 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 RPS27AP62979 156 aaKnown RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 HLA-DRB3P79483 266 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 SSBP2P81877 361 aaPredicted RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 RHOGP84095 191 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 ATP5G2Q06055 141 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 ZFP1Q6P2D0 407 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 ZNF555Q8NEP9 628 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 ACOT12Q8WYK0 555 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 GGHQ92820 318 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 KCTD12Q96CX2 325 aaKnown RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 WDR89Q96FK6 387 aaPredicted RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 PGLYRP3Q96LB9 341 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 DERL3Q96Q80 235 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 HDHD3Q9BSH5 251 aaPredicted RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 C9orf16Q9BUW7 83 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 GGTLC1Q9BX51 225 aa6.06□□□□□ -1.44
CHFR-211ENST00000535897 DIMT1Q9UNQ2 313 aaKnown RBP6.06□□□□□ -1.44
CHFR-211ENST00000535897 DNAH10Q8IVF4 4471 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 A0A0J9YWU9 116 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 ZNF785A8K8V0 405 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 PPP5D1E7EU14 171 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 PROP1O75360 226 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 WBP4O75554 376 aaKnown RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 IGLV2-23P01705 113 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 SCTP09683 121 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 OR9G9P0C7N8 305 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 FOLR2P14207 255 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 CELP19835 753 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 MAPK3P27361 379 aaPredicted RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 TAS2R43P59537 309 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 TNXAQ16473 311 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 RTL8BQ17RB0 113 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 DEFB114Q30KQ6 69 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 ZNF880Q6PDB4 577 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 RPP25LQ8N5L8 163 aaKnown RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 ADAD2Q8NCV1 583 aaKnown RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 OR52B4Q8NGK2 314 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 KCNG3Q8TAE7 436 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 TMEM80Q96HE8 168 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 RIMS4Q9H426 269 aaPredicted RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 KCNK15Q9H427 330 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 AKIP1Q9NQ31 210 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 C12orf4Q9NQ89 552 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 RDH8Q9NYR8 311 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 ZNF230Q9UIE0 474 aaPredicted RBP6.05□□□□□ -1.44
CHFR-211ENST00000535897 AK3Q9UIJ7 227 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 MGAT4AQ9UM21 535 aa6.05□□□□□ -1.44
CHFR-211ENST00000535897 LOC102724200A0A096LPH7 203 aaPredicted RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 C2orf70A6NJV1 201 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 FAM223BA6NKX1 122 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 MYL12BO14950 172 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 RBMXL2O75526 392 aaKnown RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 ACTL6BO94805 426 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 NDUFB8O95169 186 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 HLA-AP01891 365 aaKnown RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 EDN2P20800 178 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 KIR2DS2P43631 304 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 VMA21Q3ZAQ7 101 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 RBM48Q5RL73 367 aaKnown RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 GLT8D1Q68CQ7 371 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 IDO2Q6ZQW0 420 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 FAM223AQ8IWN6 122 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 SRSF12Q8WXF0 261 aaKnown RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 CACNG8Q8WXS5 425 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 PTX4Q96A99 478 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 OVOL2Q9BRP0 275 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 OR2D2Q9H210 308 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 ZC4H2Q9NQZ6 224 aa6.04□□□□□ -1.44
CHFR-211ENST00000535897 TECRQ9NZ01 308 aaKnown RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 KLK5Q9Y337 293 aaPredicted RBP6.04□□□□□ -1.44
CHFR-211ENST00000535897 RBM7Q9Y580 266 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms