RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 THBS3P49746 956 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 MZT2BQ6NZ67 158 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 GLDNQ6ZMI3 551 aaPredicted RBP12.52□□□□□ -0.4
CNN1-202ENST00000535659 ZNF383Q8NA42 475 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 OR5AN1Q8NGI8 311 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.4
CNN1-202ENST00000535659 LINC00473A8K010 186 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 CTSDP07339 412 aaPredicted RBP12.52□□□□□ -0.41
CNN1-202ENST00000535659 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 PI3P19957 117 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 CD24P25063 80 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 S100GP29377 79 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 DEFA1P59665 94 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 DEFA3P59666 94 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
CNN1-202ENST00000535659 ABCA11PQ4W5N1 156 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 PHLDA2Q53GA4 152 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 SSMEM1Q8WWF3 244 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 CAPSLQ8WWF8 208 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
CNN1-202ENST00000535659 RTBDNQ9BSG5 229 aaPredicted RBP12.52□□□□□ -0.41
CNN1-202ENST00000535659 C14orf166Q9Y224 244 aaKnown RBP12.52□□□□□ -0.41
CNN1-202ENST00000535659 H0YJW9 148 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 H3BUX3 64 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 HOXA3O43365 443 aaPredicted RBP12.51□□□□□ -0.41
CNN1-202ENST00000535659 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 RPL30P62888 115 aaKnown RBP12.51□□□□□ -0.41
CNN1-202ENST00000535659 RBMS2Q15434 407 aaKnown RBP12.51□□□□□ -0.41
CNN1-202ENST00000535659 OR5R1Q8NH85 324 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 DDB2Q92466 427 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
CNN1-202ENST00000535659 NDUFB6O95139 128 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 VENTXO95231 258 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
CNN1-202ENST00000535659 SLC6A1P30531 599 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 PIGPP57054 158 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 RND3P61587 244 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 EBI3Q14213 229 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 KCTD9Q7L273 389 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 TMEM86BQ8N661 226 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 ZDHHC22Q8N966 263 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 POC5Q8NA72 575 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 COPZ2Q9P299 210 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 WASHC3Q9Y3C0 194 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
CNN1-202ENST00000535659 FAM240BA0A1B0GVZ2 78 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 RNF212BA8MTL3 300 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 H7C2Y5 167 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 MPPED1O15442 326 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 IGKV1D-33P01593 117 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 IGKV1-33P01594 117 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 APOA2P02652 100 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 RRASP10301 218 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 CATR1Q13166 79 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
CNN1-202ENST00000535659 HES1Q14469 280 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 TBC1D26Q86UD7 250 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 CCDC71LQ8N9Z2 235 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 EAF1Q96JC9 268 aaPredicted RBP12.49□□□□□ -0.41
CNN1-202ENST00000535659 SLC35D1Q9NTN3 355 aa12.49□□□□□ -0.41
CNN1-202ENST00000535659 A0A0A6YYJ9 748 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 MOSP00540 346 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 TCRBP04435 133 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 RLN1P04808 185 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 F2RP25116 425 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 HILS1P60008 231 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 HNF4GQ14541 408 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 LY6EQ16553 131 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 RTL8BQ17RB0 113 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 PDPNQ86YL7 162 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 RBMXL1Q96E39 390 aaKnown RBP12.48□□□□□ -0.41
CNN1-202ENST00000535659 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 TNFRSF19Q9NS68 423 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
CNN1-202ENST00000535659 A6NDX4 124 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 FCGR3BO75015 233 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 CCBE1Q6UXH8 406 aaPredicted RBP12.47□□□□□ -0.41
CNN1-202ENST00000535659 SPAG16Q8N0X2 631 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 TCTEX1D1Q8N7M0 179 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 ADAD2Q8NCV1 583 aaKnown RBP12.47□□□□□ -0.41
CNN1-202ENST00000535659 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
CNN1-202ENST00000535659 RITA1Q96K30 269 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 RNF5Q99942 180 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 FLVCR2Q9UPI3 526 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 TEX13DA0A0J9YY54 714 aaPredicted RBP12.47□□□□□ -0.41
CNN1-202ENST00000535659 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 CLDN34H7C241 214 aa12.47□□□□□ -0.41
CNN1-202ENST00000535659 TCF21O43680 179 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms