RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 LGALS1P09382 135 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 GABARAPL2P60520 117 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 LFNGQ8NES3 379 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 TOLLIPQ9H0E2 274 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 Q9H521 79 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 GAB2Q9UQC2 676 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 NBEAL2Q6ZNJ1 2754 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 SORL1Q92673 2214 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 IFITM5A6NNB3 132 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 BET1O15155 118 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 FCGR3AP08637 254 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 OR10A3P58181 314 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 LINC00205P59089 165 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 SSX1Q16384 188 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 NDUFB11Q9NX14 153 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 KCNK7Q9Y2U2 307 aa12.53□□□□□ -0.4
CLSTN3-204ENST00000535313 A0A075B6Q4 140 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 METTL21EPA6NDL7 271 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 SLC25A17O43808 307 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 SAP30O75446 220 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 GSTT2P0CG29 244 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 GSTT2BP0CG30 244 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 GNB3P16520 340 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 RAB6AP20340 208 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 SLURP1P55000 103 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 TPPP2P59282 170 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 CBX3Q13185 183 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 FXYD3Q14802 87 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 MOGAT2Q3SYC2 334 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 GRPEL2Q8TAA5 225 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 DLX4Q92988 240 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 CABLES2Q9BTV7 478 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 OR2D2Q9H210 308 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 SLA2Q9H6Q3 261 aa12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-204ENST00000535313 IGHV4OR15-8A0A075B7B6 117 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 A0A087WW49 117 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 CNIH1O95406 144 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 DIRAS3O95661 229 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 HSPB1P04792 205 aaKnown RBP12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 RAB3BP20337 219 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 TALDO1P37837 337 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 LGALS7P47929 136 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 IGSF11Q5DX21 431 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 SPARTQ8N0X7 666 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 CENPOQ9BU64 300 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 YTHDF1Q9BYJ9 559 aaKnown RBP12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 TPSG1Q9NRR2 321 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 ZNF355PQ9NSJ1 428 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 U3KQK5 164 aa12.51□□□□□ -0.41
CLSTN3-204ENST00000535313 TRBV6-7A0A0A0MS04 114 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 RAB27BO00194 218 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 MFNGO00587 321 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 TRGV3P03979 118 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 GALP22466 123 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 TAGLNQ01995 201 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 KCTD21Q4G0X4 260 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 HARBI1Q96MB7 349 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 ZNF230Q9UIE0 474 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
CLSTN3-204ENST00000535313 KMT2CQ8NEZ4 4911 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 A0A0B4J203 849 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 ARPC1BO15143 372 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 MRPS14O60783 128 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 SNRPBP14678 240 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 PITPNAQ00169 270 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 C22orf42Q6IC83 251 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 POC5Q8NA72 575 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 OR6Q1Q8NGQ2 317 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 MAFIPQ8WZ33 124 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 RHOVQ96L33 236 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 ASCL2Q99929 193 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 ATG5Q9H1Y0 275 aa12.49□□□□□ -0.41
CLSTN3-204ENST00000535313 C13orf42A0A1B0GVH6 325 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 H3BUA1 57 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 SHOXO15266 292 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 IGLV2-23P01705 113 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 RRASP10301 218 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 OR5T1Q8NG75 326 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms