RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 DUPD1Q68J44 220 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TMEM53Q6P2H8 277 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 DCHS2Q6V1P9 2916 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 CCDC112Q8NEF3 446 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TBC1D31Q96DN5 1066 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 BIRC8Q96P09 236 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 PANX1Q96RD7 426 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TTTY13Q9BZ97 58 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 YIPF3Q9GZM5 350 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 CHST6Q9GZX3 395 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 GTSF1LQ9H1H1 148 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 LRP1BQ9NZR2 4599 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 BLOC1S6Q9UL45 172 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 VWFP04275 2813 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 WDR87Q6ZQQ6 2873 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 WNK2Q9Y3S1 2297 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 EML6Q6ZMW3 1958 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 MTUS2Q5JR59 1369 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 KIF24Q5T7B8 1368 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ITPR3Q14573 2671 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 A0A0J9YW62 118 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 SEC14L6B5MCN3 397 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 C10orf142B7Z368 130 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 SIVA1O15304 175 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 KLK1P06870 262 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 OR13C7P0DN81 318 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ORM2P19652 201 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 CD82P27701 267 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 GABRA2P47869 451 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 RAB38P57729 211 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 FXYD6P3P58550 94 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 GTF2BQ00403 316 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 PRDX1Q06830 199 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 DYNC1I2Q13409 638 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 USF2Q15853 346 aaPredicted RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 MIAQ16674 131 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 FAM162BQ5T6X4 162 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ARMC12Q5T9G4 340 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 FAM27BQ5VT28 67 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 PLCXD3Q63HM9 321 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 LAMTOR1Q6IAA8 161 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 EIF3MQ7L2H7 374 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 DHFR2Q86XF0 187 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 CMTM8Q8IZV2 173 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 OR1M1Q8NGA1 313 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 OR2D3Q8NGH3 330 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ZNF675Q8TD23 568 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 TSEN15Q8WW01 171 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 MCUR1Q96AQ8 359 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 PPWD1Q96BP3 646 aaKnown RBP-0.69□□□□□ -2.52
COPB1-212ENST00000534771 TESCQ96BS2 214 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ZC2HC1AQ96GY0 325 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 IMMP2LQ96T52 175 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 PRSS27Q9BQR3 290 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 CRACR2AQ9BSW2 395 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 DCSTAMPQ9H295 470 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 LYRM4Q9HD34 91 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 KDM6BO15054 1643 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 COL12A1Q99715 3063 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 RALGAPA2Q2PPJ7 1873 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ABCA2Q9BZC7 2435 aa-0.69□□□□□ -2.52
COPB1-212ENST00000534771 ANAPC1Q9H1A4 1944 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 SPTBN4Q9H254 2564 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 TRAV8-7A0A075B6U6 113 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 GOLGA8OA6NCC3 632 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 LRRIQ4A6NIV6 560 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 C21orf140B9A014 251 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 C8orf87E5RJ46 101 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 GOLGA8NF8WBI6 632 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 H0YC42 278 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 H3BT86 120 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 RFXANKO14593 260 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 UBDO15205 165 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 NOS1APO75052 506 aaPredicted RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 STK16O75716 305 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 CIB2O75838 187 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 CDK14O94921 469 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ZNF682O95780 498 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 PMCHP20382 165 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 OR1E2P47887 323 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 FOXA3P55318 350 aaPredicted RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ACTBP60709 375 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 RAB14P61106 215 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ACTG1P63261 375 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 BAXQ07812 192 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 LRRC74AQ0VAA2 488 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ZNF846Q147U1 533 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 KRTAP26-1Q6PEX3 210 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 FAM183BPQ6ZVS7 135 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 SLC35D2Q76EJ3 337 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 SPATA12Q7Z6I5 190 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 MICU2Q8IYU8 434 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 TMEM156Q8N614 296 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 OR51H1Q8NH63 302 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 NAT6Q93015 286 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 LRRC39Q96DD0 335 aa-0.7□□□□□ -2.52
COPB1-212ENST00000534771 ZNF396Q96N95 335 aaPredicted RBP-0.7□□□□□ -2.52
COPB1-212ENST00000534771 TSGA13Q96PP4 275 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms