RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 BAGE2Q86Y30 109 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 C10orf35Q96D05 121 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 UHRF2Q96PU4 802 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 SLC39A9Q9NUM3 307 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 NRASP01111 189 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 KRASP01116 189 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 OR4F5Q8NH21 305 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 OR4F4Q96R69 305 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 SF3B5Q9BWJ5 86 aaKnown RBP16.24■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF253O75346 499 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 RFPL3SP0C7P2 107 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 B4GALT1P15291 398 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 RPS18P62269 152 aaKnown RBP16.23■□□□□ 0.19
SMPD1-210ENST00000534405 TESK1Q15569 626 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 LRRC10Q5BKY1 277 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 ABHD3Q8WU67 409 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 PRO3102Q9H379 93 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 UBE2J1Q9Y385 318 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-210ENST00000534405 MUC3AQ02505 3323 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 KIAA2026Q5HYC2 2103 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 ARR3P36575 388 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 RAC3P60763 192 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 GGNQ86UU5 652 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 FGFBP3Q8TAT2 258 aa16.23■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF716A6NP11 495 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF32P17041 273 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 Q0VFX4 171 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 LRRC75BQ2VPJ9 315 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 BRICD5Q6PL45 260 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 MUC15Q8N387 334 aa16.22■□□□□ 0.19
SMPD1-210ENST00000534405 NIT1Q86X76 327 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF295-AS1Q8N0V1 137 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF525Q8N782 197 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 OR1F12Q8NHA8 337 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 SGMS2Q8NHU3 365 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 NEIL1Q96FI4 390 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-210ENST00000534405 TMEM38BQ9NVV0 291 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 IGKV1-12A0A0C4DH73 117 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 F2Z2F3 143 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 CXCL13O43927 109 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 IGKV1D-12P01611 117 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 VDAC1P21796 283 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 FOLR3P41439 243 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 HERV-K104P61576 105 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 ARG2P78540 354 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 TMEM267Q0VDI3 215 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-210ENST00000534405 SMIM21Q3B7S5 101 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 ASCL4Q6XD76 172 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 OR4F17Q8NGA8 305 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 SPSB1Q96BD6 273 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 FAM103A1Q9BTL3 118 aaKnown RBP16.21■□□□□ 0.19
SMPD1-210ENST00000534405 NRN1Q9NPD7 142 aa16.21■□□□□ 0.19
SMPD1-210ENST00000534405 TBL2Q9Y4P3 447 aaKnown RBP16.21■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF891A8MT65 544 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-210ENST00000534405 TMPRSS2O15393 492 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 TLE1Q04724 770 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 SPIN3Q5JUX0 258 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 RPP25LQ8N5L8 163 aaKnown RBP16.2■□□□□ 0.18
SMPD1-210ENST00000534405 MEGF9Q9H1U4 602 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 SRD5A2P31213 254 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 GABRA2P47869 451 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 CLDN15P56746 228 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 VWA1Q6PCB0 445 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 ZNF596Q8TC21 504 aa16.2■□□□□ 0.18
SMPD1-210ENST00000534405 MRPL18Q9H0U6 180 aaKnown RBP16.2■□□□□ 0.18
SMPD1-210ENST00000534405 COL6A3P12111 3177 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 CORTO00230 105 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 NXPH3O95157 252 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 PSG4Q00888 419 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 PIGYQ3MUY2 71 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 OR4A47Q6IF82 309 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 PRSS57Q6UWY2 283 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 TCF24Q7RTU0 167 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 TBC1D26Q86UD7 250 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 OR5P3Q8WZ94 311 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 TAAR3PQ9P1P4 343 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 SAA2-SAA4A0A096LPE2 208 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 GJE1A6NN92 205 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 TOX4O94842 621 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 REG1AP05451 166 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 CBLN1P23435 193 aa16.19■□□□□ 0.18
SMPD1-210ENST00000534405 RNPS1Q15287 305 aaKnown RBP16.19■□□□□ 0.18
SMPD1-210ENST00000534405 H3BP45 60 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 PRRX1P54821 245 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 RIPPLY3P57055 190 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 KRTAP27-1Q3LI81 207 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 WIPI1Q5MNZ9 446 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-210ENST00000534405 FAM180AQ6UWF9 173 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 AAED1Q7RTV5 226 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 PPP1R32Q7Z5V6 425 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 SGCZQ96LD1 299 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 DEPPQ9NTK1 212 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 DPRXA6NFQ7 191 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 TAX1BP3O14907 124 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 IGKV1D-33P01593 117 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 IGKV1-33P01594 117 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 P04436 131 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 NPPCP23582 126 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 OTX2P32243 289 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms