RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	FLYWCH2	Q96CP2	140 aa	Known RBP	11.42	□□□□□ -0.58
CTSB-231	ENST00000534382	ADTRP	Q96IZ2	230 aa		11.42	□□□□□ -0.58
CTSB-231	ENST00000534382	TSNAX	Q99598	290 aa	Known RBP	11.42	□□□□□ -0.58
CTSB-231	ENST00000534382	OR51J1	Q9H342	316 aa		11.42	□□□□□ -0.58
CTSB-231	ENST00000534382	ZNF580	Q9UK33	172 aa		11.42	□□□□□ -0.58
CTSB-231	ENST00000534382	VWF	P04275	2813 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	SMIM31	A0A1B0GVY4	71 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	MEIS3P1	A6NDR6	274 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	TUSC2	O75896	110 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	SLC22A5	O76082	557 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	FCER2	P06734	321 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	ZNF182	P17025	639 aa	Predicted RBP	11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	VDAC1	P21796	283 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	DUT	P33316	252 aa	Known RBP	11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	PLGLA	Q15195	96 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	PSG5	Q15238	335 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	TEX38	Q6PEX7	206 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	IFT46	Q9NQC8	304 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	ZFP57	Q9NU63	452 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	NECAP2	Q9NVZ3	263 aa		11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	METTL1	Q9UBP6	276 aa	Known RBP	11.41	□□□□□ -0.58
CTSB-231	ENST00000534382	IGKV1D-13	A0A0B4J2D9	117 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	ATP6V0E1	O15342	81 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	HPGDS	O60760	199 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	SPDEF	O95238	335 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	OR5H8	P0DN80	308 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	IGKV1-13	P0DP09	117 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	RRAS	P10301	218 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	ELK1	P19419	428 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	FCGR2C	P31995	323 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	PRSS3	P35030	304 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	RPL5	P46777	297 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	LGALS7	P47929	136 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	CX3CL1	P78423	397 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	CBX3	Q13185	183 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	RTL8B	Q17RB0	113 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	BVES	Q8NE79	360 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	OR5AP2	Q8NGF4	316 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	DDB2	Q92466	427 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	SNAPC3	Q92966	411 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	PARP11	Q9NR21	331 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	ANAPC10	Q9UM13	185 aa		11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	MRPS7	Q9Y2R9	242 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-231	ENST00000534382	LINC00473	A8K010	186 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	FCN1	O00602	326 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	IGLV2-14	P01704	120 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	IGHG4	P01861	327 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	ELANE	P08246	267 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	PF4V1	P10720	104 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	RPL23A	P62750	156 aa	Known RBP	11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	CFHR3	Q02985	330 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	FOXE3	Q13461	319 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	CDK10	Q15131	360 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	TMEM177	Q53S58	311 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	RAB2B	Q8WUD1	216 aa		11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	RBMX2	Q9Y388	322 aa	Known RBP	11.39	□□□□□ -0.59
CTSB-231	ENST00000534382	FAM25A	B3EWG3	89 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	FAM25C	B3EWG5	89 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	FAM25G	B3EWG6	89 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382		G3V318	75 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	SLC25A17	O43808	307 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	IGLV2-23	P01705	113 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	NAT1	P18440	290 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	AADAC	P22760	399 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	PPIF	P30405	207 aa	Known RBP	11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	TMBIM6	P55061	237 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	NDP	Q00604	133 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	SPCS2	Q15005	226 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	ZNF562	Q6V9R5	426 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	RNF152	Q8N8N0	203 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	GIMAP1	Q8WWP7	306 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	HARBI1	Q96MB7	349 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	CLCC1	Q96S66	551 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	BCL7B	Q9BQE9	202 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	WSB1	Q9Y6I7	421 aa		11.38	□□□□□ -0.59
CTSB-231	ENST00000534382	TRAV41	A0A0B4J266	112 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SRRM4	A7MD48	611 aa	Known RBP	11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SHOX	O15266	292 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	PPY	P01298	95 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	PF4	P02776	101 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	RPLP1	P05386	114 aa	Known RBP	11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	EGR2	P11161	476 aa	Predicted RBP	11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	PSMB8	P28062	276 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SLC6A1	P30531	599 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	CRIP2	P52943	208 aa	Predicted RBP	11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	KCTD9	Q7L273	389 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SNX29P2	Q8IUI4	249 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	GPX8	Q8TED1	209 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SECTM1	Q8WVN6	248 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	HSD17B10	Q99714	261 aa	Known RBP	11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	SCPEP1	Q9HB40	452 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	TPSG1	Q9NRR2	321 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	PRELID3B	Q9Y3B1	194 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	FBXO7	Q9Y3I1	522 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	NUBP2	Q9Y5Y2	271 aa		11.37	□□□□□ -0.59
CTSB-231	ENST00000534382	PLXNB1	O43157	2135 aa		11.36	□□□□□ -0.59
CTSB-231	ENST00000534382	CMYA5	Q8N3K9	4069 aa		11.36	□□□□□ -0.59

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