RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TMPRSS3P57727 454 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 MLF1P58340 268 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 RPL31P62899 125 aaKnown RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 DMWDQ09019 674 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 FAM71F2Q6NXP2 309 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 PRSS3P2Q8NHM4 247 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 MRGPRFQ96AM1 343 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 NEU1Q99519 415 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 CDX2Q99626 313 aaPredicted RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 RAB1BQ9H0U4 201 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 DLL3Q9NYJ7 618 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 HS3ST3B1Q9Y662 390 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 TRAV17A0A0B4J275 112 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 C21orf140B9A014 251 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RHBDL1O75783 438 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 VASH2Q86V25 355 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PDPNQ86YL7 162 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR1N2Q8NGR9 330 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 WIPF2Q8TF74 440 aaPredicted RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 FAM234AQ9H0X4 552 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 A0A1W2PR77 199 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 DLL1O00548 723 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 IGLV3-1P01715 115 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 GLI4P10075 376 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TIMP3P35625 211 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 HGFACQ04756 655 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 SPATA45Q537H7 98 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 SHISA6Q6ZSJ9 500 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TTC9CQ8N5M4 171 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ZNF645Q8N7E2 425 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR52M1Q8NGK5 317 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PRR7Q8TB68 274 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 WASHC3Q9Y3C0 194 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 MYH1P12882 1939 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 A0A0J9YW62 118 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 H0Y8G0 127 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 NEURL1O76050 574 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 FBXW9Q5XUX1 488 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TCF24Q7RTU0 167 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ZNF664Q8N3J9 261 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RPP25LQ8N5L8 163 aaKnown RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 MISP3Q96FF7 219 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 EAF1Q96JC9 268 aaPredicted RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR2D2Q9H210 308 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TNFRSF19Q9NS68 423 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ZNF492Q9P255 531 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 A0A1W2PP11 408 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ODAMA1E959 279 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RD3LP0DJH9 198 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 IGLC2P0DOY2 106 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 IGLC3P0DOY3 106 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 MGST1P10620 155 aaKnown RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 G6PCP35575 357 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PSG4Q00888 419 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TCF23Q7RTU1 214 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 FADS6Q8N9I5 356 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR2M7Q8NG81 312 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR2K2Q8NGT1 345 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 VN1R17PQ8TDU5 208 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PHF7Q9BWX1 381 aaPredicted RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 MYH8P13535 1937 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TRBV23-1A0A0A0MS06 115 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 FAM221AA4D161 298 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 SYNGR3O43761 229 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PSG2P11465 335 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 HERVK_113P61574 105 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RHOGP84095 191 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 TLE1Q04724 770 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ZNF818PQ6ZRF7 136 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 OR1L1Q8NH94 360 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 THAP3Q8WTV1 239 aaPredicted RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 RNF5Q99942 180 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 RSPO3Q9BXY4 272 aaPredicted RBP3.45□□□□□ -1.86
SOX6-217ENST00000533870 PPP1R3CQ9UQK1 317 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
SOX6-217ENST00000533870 PROB1E7EW31 1015 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 LMO1P25800 156 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 CX3CL1P78423 397 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 MEF2CQ06413 473 aaPredicted RBP3.44□□□□□ -1.86
SOX6-217ENST00000533870 PSG5Q15238 335 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 POU2AF1Q16633 256 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 DOLPP1Q86YN1 238 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 OR10D3Q8NH80 312 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 TSKUQ8WUA8 353 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 SNHG12Q9BXW3 62 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 WNT5BQ9H1J7 359 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 AAMDCQ9H7C9 122 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 HYPMO75409 117 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 IGHV4-34P06331 123 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 CXCL1P09341 107 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 OR9G9P0C7N8 305 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 SRIP30626 198 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 NHLH1Q02575 133 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 TSPO2Q5TGU0 170 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 SPSB2Q99619 263 aa3.44□□□□□ -1.86
SOX6-217ENST00000533870 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
SOX6-217ENST00000533870 FOXQ1Q9C009 403 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms