RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 B9D2Q9BPU9 175 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
CPSF1-211ENST00000533492 CENPOQ9BU64 300 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 Q9H521 79 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
CPSF1-211ENST00000533492 A0A0B4J203 849 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 RAB27BO00194 218 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 SOX15O60248 233 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 SPDEFO95238 335 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 ATP6V1G2O95670 118 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 CA2P00918 260 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 IGKV1-16P04430 117 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 HIST1H1DP16402 221 aaKnown RBP11.99□□□□□ -0.49
CPSF1-211ENST00000533492 PSMB9P28065 219 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 CBX3Q13185 183 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 ARL6IP1Q15041 203 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 AKIRIN2Q53H80 203 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 PYHIN1Q6K0P9 492 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 MAFIPQ8WZ33 124 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 GINS4Q9BRT9 223 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 TOLLIPQ9H0E2 274 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 ATG5Q9H1Y0 275 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 OR2D2Q9H210 308 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF230Q9UIE0 474 aaPredicted RBP11.99□□□□□ -0.49
CPSF1-211ENST00000533492 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
CPSF1-211ENST00000533492 TRBV6-7A0A0A0MS04 114 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 MFNGO00587 321 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 OVOL1O14753 267 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 SLC25A17O43808 307 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 CNIH1O95406 144 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-211ENST00000533492 INSL3P51460 131 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 FXYD3Q14802 87 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 C11orf87Q6NUJ2 197 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 SPARTQ8N0X7 666 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 PRR25Q96S07 402 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 CABLES2Q9BTV7 478 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
CPSF1-211ENST00000533492 SMIM30A4D0T7 59 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 LINC01619G3V211 115 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 DIRAS3O95661 229 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 LGALS7P47929 136 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 TPPP2P59282 170 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 TAGLNQ01995 201 aaKnown RBP11.97□□□□□ -0.49
CPSF1-211ENST00000533492 ASPHD1Q5U4P2 390 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 UBE2UQ5VVX9 321 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 GRPEL2Q8TAA5 225 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 FCGR1BQ92637 280 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 ARPC1AQ92747 370 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 YTHDF1Q9BYJ9 559 aaKnown RBP11.97□□□□□ -0.49
CPSF1-211ENST00000533492 ALX4Q9H161 411 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-211ENST00000533492 SLA2Q9H6Q3 261 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF355PQ9NSJ1 428 aa11.97□□□□□ -0.49
CPSF1-211ENST00000533492 TXNL4BQ9NX01 149 aaKnown RBP11.97□□□□□ -0.49
CPSF1-211ENST00000533492 NOTOA8MTQ0 251 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 LY86O95711 162 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 IGHV3-11P01762 117 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
CPSF1-211ENST00000533492 FGF9P31371 208 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-211ENST00000533492 SRSF7Q16629 238 aaKnown RBP eCLIP11.96□□□□□ -0.49
CPSF1-211ENST00000533492 RTL8BQ17RB0 113 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 CDNFQ49AH0 187 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 NR2C2APQ86WQ0 139 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 TPSG1Q9NRR2 321 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 STUB1Q9UNE7 303 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 SSR3Q9UNL2 185 aa11.96□□□□□ -0.49
CPSF1-211ENST00000533492 ZNF256Q9Y2P7 627 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-211ENST00000533492 SHOXO15266 292 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 TRGV3P03979 118 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 HSPB1P04792 205 aaKnown RBP11.95□□□□□ -0.5
CPSF1-211ENST00000533492 RRASP10301 218 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 SNRPBP14678 240 aaKnown RBP11.95□□□□□ -0.5
CPSF1-211ENST00000533492 SLURP1P55000 103 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 TPRA1Q86W33 373 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 BVESQ8NE79 360 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
CPSF1-211ENST00000533492 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 ST6GALNAC5Q9BVH7 336 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 DAPK2Q9UIK4 370 aa11.95□□□□□ -0.5
CPSF1-211ENST00000533492 LSM4Q9Y4Z0 139 aaKnown RBP11.95□□□□□ -0.5
CPSF1-211ENST00000533492 COL7A1Q02388 2944 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 SORL1Q92673 2214 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 IGHV4OR15-8A0A075B7B6 117 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 A0A087WW49 117 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 SAP30O75446 220 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 DTYMKP23919 212 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 Q6ZS49 121 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 OR5T1Q8NG75 326 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 ADTRPQ96IZ2 230 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 RHOVQ96L33 236 aa11.94□□□□□ -0.5
CPSF1-211ENST00000533492 ELF5Q9UKW6 265 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-211ENST00000533492 RRP15Q9Y3B9 282 aaKnown RBP11.94□□□□□ -0.5
CPSF1-211ENST00000533492 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms