RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 NRN1Q9NPD7 142 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 LHX9Q9NQ69 397 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 A0A1W2PP11 408 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 EFNB2P52799 333 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 WIPI1Q5MNZ9 446 aaPredicted RBP6.85□□□□□ -1.31
CSRP1-218ENST00000533402 FAM71F2Q6NXP2 309 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 GAPTQ8N292 157 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 GBGT1Q8N5D6 347 aa6.85□□□□□ -1.31
CSRP1-218ENST00000533402 MRM2Q9UI43 246 aaKnown RBP6.85□□□□□ -1.31
CSRP1-218ENST00000533402 PPIAL4EA0A075B759 164 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM30CPA0ZSE6 113 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM50AO95807 157 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 PPYP01298 95 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 PPIAL4FP0DN26 164 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 PAX2Q02962 417 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 OR13H1Q8NG92 308 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 PPIAL4AQ9Y536 164 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 ABCA7Q8IZY2 2146 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 EP300Q09472 2414 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 DHRS3O75911 302 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 SERF1AO75920 110 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 UMODP07911 640 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 RAE1P78406 368 aaKnown RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 FOXQ1Q9C009 403 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 CST9LQ9H4G1 147 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 SEMA5BQ9P283 1151 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM202A6NGA9 273 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 CEACAM1P13688 526 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 CD22P20273 847 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 LGALS7P47929 136 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 CCDC144NLQ6NUI1 221 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM170AQ8WVE7 144 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 NEU1Q99519 415 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 GPR27Q9NS67 375 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 RLFQ13129 1914 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 A0A087WUJ7 227 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 A0A0B4J2E0 115 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 A0A1B0GX12 115 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 VENTXO95231 258 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 ATP5IP56385 69 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H1AQ02539 215 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 FXYD3Q14802 87 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 KRTCAP3Q53RY4 240 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM252Q8N6L7 170 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 OR52E5Q8NH55 327 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 FBLIM1Q8WUP2 373 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 ANKRD10Q9NXR5 420 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 DAPP1Q9UN19 280 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 CA13Q8N1Q1 262 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF441Q8N8Z8 693 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 STXBP6Q8NFX7 210 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 SP7Q8TDD2 431 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 ATP6V0BQ99437 205 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 TAAR3PQ9P1P4 343 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
CSRP1-218ENST00000533402 HDGFL3Q9Y3E1 203 aa6.84□□□□□ -1.31
CSRP1-218ENST00000533402 PRSS47A8MTI9 375 aa6.84□□□□□ -1.32
CSRP1-218ENST00000533402 DNAL4O96015 105 aa6.84□□□□□ -1.32
CSRP1-218ENST00000533402 AMBPP02760 352 aa6.84□□□□□ -1.32
CSRP1-218ENST00000533402 THSD4Q6ZMP0 1018 aa6.84□□□□□ -1.32
CSRP1-218ENST00000533402 FGF14Q92915 247 aa6.84□□□□□ -1.32
CSRP1-218ENST00000533402 CDC42EP2O14613 210 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 ISG15P05161 165 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 NPSP0C0P6 89 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PQLC2Q6ZP29 291 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 MRGPRFQ96AM1 343 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 ZNF391Q9UJN7 358 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 IFNL4K9M1U5 179 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 EREGO14944 169 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 ATXN7O15265 892 aaPredicted RBP6.83□□□□□ -1.32
CSRP1-218ENST00000533402 KCNMB1Q16558 191 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PNKDQ8N490 385 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 SMIM8Q96KF7 97 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 SEBOXQ9HB31 216 aaPredicted RBP6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PDFQ9HBH1 243 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PPIL1Q9Y3C6 166 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PGPEP1LA6NFU8 196 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 TGFAP01135 160 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 IGHV2-70P01814 119 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 ASAH2BP0C7U1 165 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 ZNF324BQ6AW86 544 aaPredicted RBP6.83□□□□□ -1.32
CSRP1-218ENST00000533402 TEPPQ6URK8 271 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 BHLHA15Q7RTS1 189 aaPredicted RBP6.83□□□□□ -1.32
CSRP1-218ENST00000533402 HOGA1Q86XE5 327 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 OR1F12Q8NHA8 337 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 TSPAN32Q96QS1 320 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 PCNX2A6NKB5 2137 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 OR11H12B2RN74 326 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
CSRP1-218ENST00000533402 LGALS3P17931 250 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms