RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SPRY3O43610 288 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 NKX6-1P78426 367 aaPredicted RBP12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 KHDC3LQ587J8 217 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 RIF1Q5UIP0 2472 aaKnown RBP12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF429Q86V71 674 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 MOGAT3Q86VF5 341 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 DIDO1Q9BTC0 2240 aaKnown RBP12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 ZFP92A6NM28 416 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 C1orf196B1AJZ1 125 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB5AP20339 215 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 AGAP20933 346 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 CFHR2P36980 270 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF134P52741 427 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB2AP61019 212 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 SERF2P84101 59 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 RTP5Q14D33 572 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 MORN2Q502X0 79 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF787Q6DD87 383 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF66Q6ZN08 573 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 MEGF10Q96KG7 1140 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 PARD6GQ9BYG4 376 aaPredicted RBP12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ATMQ13315 3056 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 MARCH11A6NNE9 402 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB29O14966 203 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 CRYAAP02489 173 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 ADH4P08319 380 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 SELLP14151 372 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 GLRXP35754 106 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 MZT1Q08AG7 82 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM90A1Q86YD7 464 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 RPP25LQ8N5L8 163 aaKnown RBP12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 HSD17B10Q99714 261 aaKnown RBP12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 UNKLQ9H9P5 680 aaKnown RBP12.74□□□□□ -0.37
CACNA1E-208ENST00000533229 CHD3Q12873 2000 aaKnown RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 UBE2CO00762 179 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 LHBP01229 141 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 GZMHP20718 246 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 DLK1P80370 383 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM27E3Q08E93 113 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 ADAM5Q6NVV9 412 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 SNX22Q96L94 193 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 MGST3O14880 152 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 RBMXL2O75526 392 aaKnown RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 OR2C1O95371 312 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 EIF2S3P41091 472 aaKnown RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 LOXL3P58215 753 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 C1orf229Q6ZS94 237 aaPredicted RBP12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 MUCL1Q96DR8 90 aa12.73□□□□□ -0.37
CACNA1E-208ENST00000533229 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 IGLV3-9A0A075B6K5 115 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 KLK10O43240 276 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 OR9G9P0C7N8 305 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 BCL2P10415 239 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 TIMP3P35625 211 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 GPR12P47775 334 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 EDDM3BP56851 147 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 S100A12P80511 92 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM90A2PQ658T7 463 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 TRAT1Q6PIZ9 186 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 DUX4L9Q6RFH8 374 aaPredicted RBP12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM180AQ6UWF9 173 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF561Q8N587 486 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 TCTEX1D1Q8N7M0 179 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 PRSS33Q8NF86 280 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 Q8TCH9 128 aa12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 QTRT1Q9BXR0 403 aaKnown RBP12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
CACNA1E-208ENST00000533229 FCGR3BO75015 233 aa12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB11AP62491 216 aa12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 R3HDM4Q96D70 268 aa12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM234AQ9H0X4 552 aa12.71□□□□□ -0.37
CACNA1E-208ENST00000533229 LINC00587B1AMM8 73 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 MAS1LP35410 378 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 OR2B8PP59922 312 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 FABP9Q0Z7S8 132 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 SSX9Q7RTT3 188 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 VKORC1L1Q8N0U8 176 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms