RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 CMTM1Q8IZ96 169 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 CCDC71LQ8N9Z2 235 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 LHX4Q969G2 390 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 C18orf12Q96KH6 178 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 HSD17B10Q99714 261 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 PCGF1Q9BSM1 259 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 OR51J1Q9H342 316 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 DPM3Q9P2X0 92 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 MINOS1-NBL1R4GNA1 71 aa6.88□□□□□ -1.31
PMS2P3-208ENST00000533167 WNK2Q9Y3S1 2297 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 AKAP9Q99996 3911 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 FAM90A9PA6NNJ1 464 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 OOSP1A8MZH6 123 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 NPFFO15130 113 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 RAMP3O60896 148 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 B3GALNT1O75752 331 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 IFNA2P01563 188 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 ARG1P05089 322 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 IL6RP08887 468 aaPredicted RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TRAPPC2P0DI81 140 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TRAPPC2BP0DI82 140 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SULT1A3P0DMM9 295 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SULT1A4P0DMN0 295 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 HTR1DP28221 377 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 REG1BP48304 166 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 THBS3P49746 956 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 BCAP31P51572 246 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SRSF4Q08170 494 aaKnown RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 IL15RAQ13261 267 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 FCN2Q15485 313 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 POU2AF1Q16633 256 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 ABCA11PQ4W5N1 156 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 C4orf46Q504U0 113 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 LIAT1Q6ZQX7 453 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SGPP2Q8IWX5 399 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 PDZD9Q8IXQ8 264 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SELENOHQ8IZQ5 122 aaKnown RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 C12orf45Q8N5I9 185 aaPredicted RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TCTEX1D1Q8N7M0 179 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 OR10X1Q8NGY0 326 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 OR51H1Q8NH63 302 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 IL22RA2Q969J5 263 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 S1PR3Q99500 378 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TBL2Q9Y4P3 447 aaKnown RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 RBM7Q9Y580 266 aaKnown RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 SOX21Q9Y651 276 aaPredicted RBP6.87□□□□□ -1.31
PMS2P3-208ENST00000533167 TRAV40A0A0B4J280 105 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 IGHV1-3A0A0C4DH29 117 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 LEUTXA8MZ59 168 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 TOR1AO14656 332 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 CD5LO43866 347 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 CREBL2O60519 120 aaPredicted RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 IGKV1-16P04430 117 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 CXCL3P19876 107 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 VAMP1P23763 118 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 PAX6P26367 422 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 SAA4P35542 130 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 RRAS2P62070 204 aaPredicted RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 EBI3Q14213 229 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 NMSQ5H8A3 153 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 RUSC1-AS1Q66K80 236 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 C9orf139Q6ZV77 190 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 TGIF2LXQ8IUE1 241 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 SPAG16Q8N0X2 631 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 PIFOQ8TCI5 191 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 CASTOR1Q8WTX7 329 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 TCTEX1D2Q8WW35 142 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 SEC22AQ96IW7 307 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 ADTRPQ96IZ2 230 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 GPN1Q9HCN4 374 aaPredicted RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 LIN7CQ9NUP9 197 aaKnown RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 AMMECR1Q9Y4X0 333 aaPredicted RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 ACANP16112 2415 aa6.86□□□□□ -1.31
PMS2P3-208ENST00000533167 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 IGHV3OR16-10A0A075B7F0 116 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 MPTX1A8MV57 137 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 G3V3Q6 166 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 TIMM23O14925 209 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 ADAP1O75689 374 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 OR2A4O95047 310 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 S1PR2O95136 353 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 IGLV2-23P01705 113 aa6.85□□□□□ -1.31
PMS2P3-208ENST00000533167 GAPDHP04406 335 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms